RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CHIT1Q13231 466 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 Q5W150 140 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 FBXW9Q5XUX1 488 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 CENPPQ6IPU0 288 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 ZNF880Q6PDB4 577 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 CASC1Q6TDU7 716 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 STRADAQ7RTN6 431 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 UBALD2Q8IYN6 164 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 ZCCHC7Q8N3Z6 543 aaKnown RBP1.96□□□□□ -2.1
CD46-218ENST00000496723 MREGQ8N565 214 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 EIF1ADQ8N9N8 165 aaKnown RBP1.96□□□□□ -2.1
CD46-218ENST00000496723 BHLHE23Q8NDY6 225 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 OR5D13Q8NGL4 314 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 OR10G4Q8NGN3 311 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 PDXPQ96GD0 296 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 SLC41A3Q96GZ6 507 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 WFIKKN1Q96NZ8 548 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 PSKH2Q96QS6 385 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 LINC00597Q9H2U6 94 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 MCCC2Q9HCC0 563 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 COX16Q9P0S2 106 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 WDR62O43379 1518 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 BRWD3Q6RI45 1802 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 GPR179Q6PRD1 2367 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 TRAV40A0A0B4J280 105 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 A0A1B0GVX0 72 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 C7orf66A4D0T2 115 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 H0YHG0 523 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 KMOO15229 486 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 MGRN1O60291 552 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 SURF6O75683 361 aaKnown RBP1.95□□□□□ -2.1
CD46-218ENST00000496723 VAMP5O95183 116 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 RCBTB2O95199 551 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 CLDN9O95484 217 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 IL1BP01584 269 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 DCNP07585 359 aaKnown RBP1.95□□□□□ -2.1
CD46-218ENST00000496723 ADRA2AP08913 450 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 NCK1P16333 377 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 RAP1AP62834 184 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 OGDHQ02218 1023 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 DGUOKQ16854 277 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 IMMTQ16891 758 aaKnown RBP1.95□□□□□ -2.1
CD46-218ENST00000496723 KRTAP13-2Q52LG2 175 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 HES5Q5TA89 166 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 TRIM40Q6P9F5 258 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 KDELC1Q6UW63 502 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 SHISA6Q6ZSJ9 500 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 NCCRP1Q6ZVX7 275 aaPredicted RBP1.95□□□□□ -2.1
CD46-218ENST00000496723 TRIM69Q86WT6 500 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 FAM83FQ8NEG4 500 aaPredicted RBP1.95□□□□□ -2.1
CD46-218ENST00000496723 ZNF461Q8TAF7 563 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 SCFD1Q8WVM8 642 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.95□□□□□ -2.1
CD46-218ENST00000496723 C10orf35Q96D05 121 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 RMI2Q96E14 147 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 MED8Q96G25 268 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 MS4A4EQ96PG1 132 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 ZBTB18Q99592 522 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 CHAC1Q9BUX1 264 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 OSBPL10Q9BXB5 764 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 RPP21Q9H633 154 aaKnown RBP1.95□□□□□ -2.1
CD46-218ENST00000496723 SGK2Q9HBY8 427 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 ZNF355PQ9NSJ1 428 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 MARCOQ9UEW3 520 aaPredicted RBP1.95□□□□□ -2.1
CD46-218ENST00000496723 GGA2Q9UJY4 613 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 ADAM28Q9UKQ2 775 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 WIF1Q9Y5W5 379 aa1.95□□□□□ -2.1
CD46-218ENST00000496723 TUBGCP6Q96RT7 1819 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 FAM240BA0A1B0GVZ2 78 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 SRP72O76094 671 aaKnown RBP1.94□□□□□ -2.1
CD46-218ENST00000496723 ATP1B3P54709 279 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 UBE2HP62256 183 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 ZMYND11Q15326 602 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 COX19Q49B96 90 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 PDZK1Q5T2W1 519 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 RUFY3Q7L099 469 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 NEGR1Q7Z3B1 354 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 TGIF2LXQ8IUE1 241 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 MYOCDQ8IZQ8 938 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 LRRC75A-AS1Q8N1F1 130 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 STPG2Q8N412 459 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 ZNF557Q8N988 423 aaPredicted RBP1.94□□□□□ -2.1
CD46-218ENST00000496723 FAM110BQ8TC76 370 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 OR10C1Q96KK4 312 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 IFT74Q96LB3 600 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 MTMR9Q96QG7 549 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 SORT1Q99523 831 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 FAIM2Q9BWQ8 316 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 AZI2Q9H6S1 392 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 FN3KRPQ9HA64 309 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 PIGLQ9Y2B2 252 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 NPTNQ9Y639 398 aa1.94□□□□□ -2.1
CD46-218ENST00000496723 SYNJ2BP-COX16A0A087WUM0 186 aa1.93□□□□□ -2.1
CD46-218ENST00000496723 A0A1B0GVL5 298 aa1.93□□□□□ -2.1
CD46-218ENST00000496723 SNTNA6NMZ2 147 aa1.93□□□□□ -2.1
CD46-218ENST00000496723 MPHOSPH10O00566 681 aaKnown RBP1.93□□□□□ -2.1
CD46-218ENST00000496723 TIMM8AO60220 97 aaPredicted RBP1.93□□□□□ -2.1
CD46-218ENST00000496723 FCMRO60667 390 aa1.93□□□□□ -2.1
CD46-218ENST00000496723 TSPAN12O95859 305 aa1.93□□□□□ -2.1
CD46-218ENST00000496723 FGF1P05230 155 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms