RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ARMCX1Q9P291 453 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 RIMS3Q9UJD0 308 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 FBXO9Q9UK97 447 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-209ENST00000496445 CAPN7Q9Y6W3 813 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 SH3PXD2BA1X283 911 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 BLOC1S5-TXNDC5H3BN57 136 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 DHHO43323 396 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 STAMBPO95630 424 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 IGF2P01344 180 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 IGHG1P01857 330 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 HIST1H2ABP04908 130 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 F13BP05160 661 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 VIMP08670 466 aaKnown RBP12.29□□□□□ -0.44
VTI1A-209ENST00000496445 ADRA2AP08913 450 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 DAOP14920 347 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 FUT1P19526 365 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 FUT4P22083 530 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 AQP2P41181 271 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 HIST3H2AQ7L7L0 130 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 LRP11Q86VZ4 500 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 POU5F2Q8N7G0 328 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 OR2T12Q8NG77 320 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 TMEM239Q8WW34 195 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 HIST1H2ACQ93077 130 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 MCHR2Q969V1 340 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 RCN3Q96D15 328 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 MSI2Q96DH6 328 aaKnown RBP12.29□□□□□ -0.44
VTI1A-209ENST00000496445 SGTBQ96EQ0 304 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 KCNK17Q96T54 332 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 SH3GL3Q99963 347 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 SOX7Q9BT81 388 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 MRPL13Q9BYD1 178 aaKnown RBP12.29□□□□□ -0.44
VTI1A-209ENST00000496445 TPK1Q9H3S4 243 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 DYNLRB1Q9NP97 96 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 CMTM6Q9NX76 183 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 MYEF2Q9P2K5 600 aaKnown RBP12.29□□□□□ -0.44
VTI1A-209ENST00000496445 CMAHPQ9Y471 501 aa12.29□□□□□ -0.44
VTI1A-209ENST00000496445 BCL10O95999 233 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 QDPRP09417 244 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 OR8G3PP0DMU2 310 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 APEHP13798 732 aaKnown RBP12.28□□□□□ -0.44
VTI1A-209ENST00000496445 IGFBP5P24593 272 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 GIFP27352 417 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 KDELR2P33947 212 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 GLRXP35754 106 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 EVX1P49640 407 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 GZMKP49863 264 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 CLRN1P58418 232 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 MYBPC1Q00872 1141 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 MICU2Q8IYU8 434 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 PAQR4Q8N4S7 273 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-209ENST00000496445 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 PCYOX1LQ8NBM8 494 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 OR4K5Q8NGD3 323 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 NEU4Q8WWR8 484 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-209ENST00000496445 LIPHQ8WWY8 451 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 SYT3Q9BQG1 590 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 GID8Q9NWU2 228 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 CDC42EP3Q9UKI2 254 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 FBXL3Q9UKT7 428 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 FZR1Q9UM11 496 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 A4GNTQ9UNA3 340 aa12.28□□□□□ -0.44
VTI1A-209ENST00000496445 IGKV1D-43A0A0B4J1Z2 117 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 A0A1W2PRG6 482 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 ELOVL7A1L3X0 281 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 LRP5LA4QPB2 252 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 VSTM5A8MXK1 200 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 CENPBD1B2RD01 187 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 MCIDASD6RGH6 385 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 SLC22A2O15244 555 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 TRMUO75648 421 aaKnown RBP12.27□□□□□ -0.45
VTI1A-209ENST00000496445 SERPINA5P05154 406 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 FAM157CP0CG43 387 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 THRBP10828 461 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF23P17027 643 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 IL2RGP31785 369 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 ALDH3B1P43353 468 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF133P52736 654 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-209ENST00000496445 MAD2L1BPQ15013 274 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-209ENST00000496445 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 C10orf128Q5T292 105 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 ARMC4Q5T2S8 1044 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 PODNL1Q6PEZ8 512 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 VTCN1Q7Z7D3 282 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 SYT14Q8NB59 555 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
VTI1A-209ENST00000496445 TPD52L3Q96J77 140 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 PRRC1Q96M27 445 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 INIPQ9NRY2 104 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 SLC7A8Q9UHI5 535 aa12.27□□□□□ -0.45
VTI1A-209ENST00000496445 LOC100289279A0A1B0GTE1 492 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 LYNX1G3V0Z9 82 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 M0R233 179 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SYNGR3O43761 229 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 LMX1BO60663 402 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 LILRA1O75019 489 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 FARS2O95363 451 aaKnown RBP12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SLC2A10O95528 541 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 IFNA14P01570 189 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms