RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ZFAND1Q8TCF1 268 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ST8SIA1Q92185 356 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 TMEM106AQ96A25 262 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 OR2M2Q96R28 347 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 OR8B4Q96RC9 309 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 PLEKHA1Q9HB21 404 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SLC22A11Q9NSA0 550 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF275Q9NSD4 429 aaPredicted RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 ANKRD10Q9NXR5 420 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 MRPL39Q9NYK5 338 aaKnown RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 KCNG2Q9UJ96 466 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 NAP1L6A6NFF2 107 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 ANKUB1A6NFN9 424 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 CENPBD1B2RD01 187 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 PLPP3O14495 311 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 GPANK1O95872 356 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 ANKRD34CP0C6C1 535 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 CRABP1P29762 137 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 ART1P52961 327 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 TNK1Q13470 666 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 SHBQ15464 509 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 MEP1BQ16820 701 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 NKAIN1Q4KMZ8 207 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 TMEM69Q5SWH9 247 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 FDX2Q6P4F2 183 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF227Q86WZ6 799 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF679Q8IYX0 411 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 APCDD1LQ8NCL9 501 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 OR6S1Q8NH40 331 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 FCAMRQ8WWV6 532 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 MIB2Q96AX9 1013 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 PHF21AQ96BD5 680 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 HAVCR1Q96D42 359 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 SLC25A38Q96DW6 304 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 OR6C1Q96RD1 312 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF587Q96SQ5 575 aaPredicted RBP9.99□□□□□ -0.81
CMSS1-208ENST00000496116 GON7Q9BXV9 100 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 AUNIPQ9H7T9 357 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 PLSCR3Q9NRY6 295 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 SLCO1C1Q9NYB5 712 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 OR5V1Q9UGF6 321 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 ATXN7L1Q9ULK2 861 aaPredicted RBP9.99□□□□□ -0.81
CMSS1-208ENST00000496116 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
CMSS1-208ENST00000496116 CABIN1Q9Y6J0 2220 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 GPR171O14626 319 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ALOX12BO75342 701 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 KRT33AO76009 404 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 TPPPO94811 219 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 LDOC1O95751 146 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 MAS1P04201 325 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ADRB1P08588 477 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 APOBEC1P41238 236 aaKnown RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 CCR9P51686 369 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SUMO3P55854 103 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 CLDN12P56749 244 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ADAM8P78325 824 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 GLO1Q04760 184 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SQSTM1Q13501 440 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SLC17A1Q14916 467 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 NR0B2Q15466 257 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 LYSMD4Q5XG99 296 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 CD276Q5ZPR3 534 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 PWWP2BQ6NUJ5 590 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 BTN2A1Q7KYR7 527 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 LRRTM1Q86UE6 522 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 TMPRSS12Q86WS5 348 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 DND1Q8IYX4 353 aaKnown RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 OR56B4Q8NH76 319 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 NXPE2Q96DL1 559 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 C4orf45Q96LM5 186 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 HYLS1Q96M11 299 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 OR11A1Q9GZK7 315 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 GHITMQ9H3K2 345 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ELOVL3Q9HB03 270 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 RARRES3Q9UL19 164 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ARID1BQ8NFD5 2236 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 PCNX3Q9H6A9 2034 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 A0A087WV48 116 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 TRBV5-7A0A0A0MS05 114 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SLC22A23A1A5C7 686 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 CPED1A4D0V7 1026 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SCRG1O75711 98 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 MT-ND4P03905 459 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 DCNP07585 359 aaKnown RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SPARCP09486 303 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 H2AFB2P0C5Z0 115 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 EPHA8P29322 1005 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 CCR6P51684 374 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 DCDP81605 110 aaKnown RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 INSM1Q01101 510 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 PUDPQ08623 228 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ANGPT1Q15389 498 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 WDR38Q5JTN6 314 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 DNM1P34Q6PK57 102 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF574Q6ZN55 896 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 LRRC69Q6ZNQ3 347 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 KRT77Q7Z794 578 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 PRSS35Q8N3Z0 413 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 OR5L2Q8NGL0 311 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms