RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 HDDC2Q7Z4H3 204 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 DPPA2Q7Z7J5 298 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 MICU2Q8IYU8 434 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
PTPRF-214ENST00000496043 OR2T12Q8NG77 320 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 PFN4Q8NHR9 129 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 RP9Q8TA86 221 aaKnown RBP11□□□□□ -0.65
PTPRF-214ENST00000496043 TMEM255BQ8WV15 326 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 LIPHQ8WWY8 451 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 TPD52L3Q96J77 140 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 BEX2Q9BXY8 128 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 MS4A5Q9H3V2 200 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 CCDC134Q9H6E4 229 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 INIPQ9NRY2 104 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF224Q9NZL3 707 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 CDC42EP3Q9UKI2 254 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 MED31Q9Y3C7 131 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 ARFGEF3Q5TH69 2177 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 SLC22A23A1A5C7 686 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 HTR3EA5X5Y0 456 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 CENPBD1B2RD01 187 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 MCIDASD6RGH6 385 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 SYNGR3O43761 229 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 LMX1BO60663 402 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 PTHP01270 115 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 PATE4P0C8F1 98 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 PGA4P0DJD7 388 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 PGA3P0DJD8 388 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 APEHP13798 732 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 AQP2P41181 271 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 DAP3P51398 398 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF84P51523 738 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 UGT2B15P54855 530 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 RPS23P62266 143 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 RPL18Q07020 188 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 ST3GAL3Q11203 375 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 LAPTM4AQ15012 233 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 HIST3H3Q16695 136 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 LRRC23Q53EV4 343 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 CDK20Q8IZL9 346 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF786Q8N393 782 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 FGFBP3Q8TAT2 258 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 UBASH3BQ8TF42 649 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 LZICQ8WZA0 190 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 MCHR2Q969V1 340 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 MRPL24Q96A35 216 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 SH3GL3Q99963 347 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 MRPL13Q9BYD1 178 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 MRPL37Q9BZE1 423 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 KCNN2Q9H2S1 579 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 TMEM38BQ9NVV0 291 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF446Q9NWS9 450 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 STX18Q9P2W9 335 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 REV1Q9UBZ9 1251 aa10.99□□□□□ -0.65
PTPRF-214ENST00000496043 CHD3Q12873 2000 aaKnown RBP10.99□□□□□ -0.65
PTPRF-214ENST00000496043 SONP18583 2426 aaKnown RBP10.98□□□□□ -0.65
PTPRF-214ENST00000496043 IGHV4-61A0A0C4DH41 118 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 LOC100289279A0A1B0GTE1 492 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 CCDC22O60826 627 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 TRMUO75648 421 aaKnown RBP10.98□□□□□ -0.65
PTPRF-214ENST00000496043 ACADSP16219 412 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF23P17027 643 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 GIFP27352 417 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 PLP2Q04941 152 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 FXNQ16595 210 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 SLC36A2Q495M3 483 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 NRN1LQ496H8 165 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 FAM166AQ6J272 317 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 SLC16A14Q7RTX9 510 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 ARPINQ7Z6K5 226 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 SYT14Q8NB59 555 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 OR4K5Q8NGD3 323 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 OR1J2Q8NGS2 313 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 RCN3Q96D15 328 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF347Q96SE7 839 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 HOPXQ9BPY8 73 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-214ENST00000496043 BPESC1Q9GZL8 116 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 SHARPINQ9H0F6 387 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 LRMDAQ9H2I8 198 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 C1orf198Q9H425 327 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 C20orf141Q9NUB4 165 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 CMTM6Q9NX76 183 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 ARMCX1Q9P291 453 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 LPAR3Q9UBY5 353 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 SLC7A8Q9UHI5 535 aa10.98□□□□□ -0.65
PTPRF-214ENST00000496043 IQCMA0A1B0GVH7 501 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 M0R233 179 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 GSTA4O15217 222 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 IGFBP1P08833 259 aaPredicted RBP10.97□□□□□ -0.65
PTPRF-214ENST00000496043 TSPAN19P0C672 248 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 FAM157CP0CG43 387 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 COX4I1P13073 169 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 MDH1P40925 334 aaKnown RBP10.97□□□□□ -0.65
PTPRF-214ENST00000496043 SELENOVP59797 346 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 MYBPC1Q00872 1141 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 RUNX1T1Q06455 604 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 TAF11Q15544 211 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 MSMPQ1L6U9 139 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 CXXC5Q7LFL8 322 aaKnown RBP10.97□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF584Q8IVC4 421 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms