RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 BPGMP07738 259 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 ZCCHC18P0CG32 403 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 NQO1P15559 274 aaKnown RBP11.35□□□□□ -0.59
COL1A1-209ENST00000495677 LBPP18428 481 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 MAKP20794 623 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 SLC6A9P48067 706 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 PUDPQ08623 228 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 PMS2P3Q13401 168 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 TSTQ16762 297 aaKnown RBP11.35□□□□□ -0.59
COL1A1-209ENST00000495677 TBC1D28Q2M2D7 210 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 FAM91A1Q658Y4 838 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 OGFOD2Q6N063 350 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 WDR88Q6ZMY6 472 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 EIF1ADQ8N9N8 165 aaKnown RBP11.35□□□□□ -0.59
COL1A1-209ENST00000495677 OR52E6Q96RD3 313 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 MRI1Q9BV20 369 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 LRMDAQ9H2I8 198 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 PATZ1Q9HBE1 687 aaKnown RBP11.35□□□□□ -0.59
COL1A1-209ENST00000495677 BEX1Q9HBH7 125 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 BCL2L10Q9HD36 194 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 GLTPQ9NZD2 209 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 RPS6KB2Q9UBS0 482 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 KLHL21Q9UJP4 597 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 NPTNQ9Y639 398 aa11.35□□□□□ -0.59
COL1A1-209ENST00000495677 M0QZ24 198 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 PLPP3O14495 311 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 FARS2O95363 451 aaKnown RBP11.34□□□□□ -0.59
COL1A1-209ENST00000495677 PLATP00750 562 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 IGHV2-70P01814 119 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CD55P08174 381 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 MYZAPP0CAP1 466 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CCL2P13500 99 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 ETFAP13804 333 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 DRD4P21917 467 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CBLP22681 906 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CPT2P23786 658 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CSNK1A1P48729 337 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 DSTNP60981 165 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 UFM1P61960 85 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 ZNF718Q3SXZ3 478 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 TMEM155Q4W5P6 130 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 ALG10BQ5I7T1 473 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 FAM205BPQ63HN1 556 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 TMEM53Q6P2H8 277 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 ULK3Q6PHR2 472 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 LRFN4Q6PJG9 635 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 C17orf107Q6ZR85 190 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 RHOUQ7L0Q8 258 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 KIRREL3Q8IZU9 778 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 OR6X1Q8NH79 312 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 DIRC2Q96SL1 478 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 EPYCQ99645 322 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 PKP2Q99959 881 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 ASPNQ9BXN1 380 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 EGLN1Q9GZT9 426 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CACYBPQ9HB71 228 aaKnown RBP11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CYSLTR2Q9NS75 346 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 TMEM38BQ9NVV0 291 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 UBAP1Q9NZ09 502 aa11.34□□□□□ -0.59
COL1A1-209ENST00000495677 CGGBP1Q9UFW8 167 aaPredicted RBP11.34□□□□□ -0.59
COL1A1-209ENST00000495677 PLXNB1O43157 2135 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 IQCMA0A1B0GVH7 501 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 A0A1B0GWA3 101 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 ISPDA4D126 451 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 SMIM23A6NLE4 172 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 RFXANKO14593 260 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 NGFP01138 241 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 IL12AP29459 219 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 CRATP43155 626 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 ETV4P43268 484 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 HOXC5Q00444 222 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 SRSF4Q08170 494 aaKnown RBP11.33□□□□□ -0.6
COL1A1-209ENST00000495677 SLC36A2Q495M3 483 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 MBNL2Q5VZF2 373 aaKnown RBP11.33□□□□□ -0.6
COL1A1-209ENST00000495677 OLFML2AQ68BL7 652 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 SPATC1Q76KD6 591 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 LRRC28Q86X40 367 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-209ENST00000495677 KLHL36Q8N4N3 616 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 SPICQ8N5J4 248 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 KIR3DL3Q8N743 410 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 ZNF781Q8N8C0 355 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 OR52E2Q8NGJ4 325 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 OR1J1Q8NGS3 322 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 UBLCP1Q8WVY7 318 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-209ENST00000495677 GTF3AQ92664 365 aaKnown RBP11.33□□□□□ -0.6
COL1A1-209ENST00000495677 TAF15Q92804 592 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL1A1-209ENST00000495677 SLC47A1Q96FL8 570 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 PPP1R36Q96LQ0 422 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 CCT8L2Q96SF2 557 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 RNF121Q9H920 327 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 TPT1P8Q9HAU6 139 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 IL20RAQ9UHF4 553 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 HAO1Q9UJM8 370 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 ZDHHC8Q9ULC8 765 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 RAP2CQ9Y3L5 183 aa11.33□□□□□ -0.6
COL1A1-209ENST00000495677 TMEM247A6NEH6 219 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 F5H0A9 414 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-209ENST00000495677 DHHO43323 396 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms