RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CCL2P13500 99 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 ZNF250P15622 560 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 PLP2Q04941 152 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 BST1Q10588 318 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 FADDQ13158 208 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 KRT71Q3SY84 523 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 SLC36A2Q495M3 483 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 VPS33AQ96AX1 596 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 ELMOD3Q96FG2 381 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 SH3GL3Q99963 347 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 SSU72Q9NP77 194 aaKnown RBP12.14□□□□□ -0.47
VARS-228ENST00000495010 KCNK9Q9NPC2 374 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 GLTPQ9NZD2 209 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 TESQ9UGI8 421 aaKnown RBP12.14□□□□□ -0.47
VARS-228ENST00000495010 HDAC3O15379 428 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 MT-ATP6P00846 226 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 KITP10721 976 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 POLR2JP52435 117 aaKnown RBP12.13□□□□□ -0.47
VARS-228ENST00000495010 UCP2P55851 309 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 RGS8P57771 180 aaPredicted RBP12.13□□□□□ -0.47
VARS-228ENST00000495010 ERVS71-1P61550 626 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 LCN2P80188 198 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 GLO1Q04760 184 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 SLC3A1Q07837 685 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 OR1Q1Q15612 314 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 ARMCX4Q5H9R4 360 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 CEP85LQ5SZL2 805 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 DHRS4L2Q6PKH6 230 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 TREML4Q6UXN2 200 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 SLC35D2Q76EJ3 337 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 SLC16A14Q7RTX9 510 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 RANBP3LQ86VV4 465 aaPredicted RBP12.13□□□□□ -0.47
VARS-228ENST00000495010 WDFY1Q8IWB7 410 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 CPEB3Q8NE35 698 aaKnown RBP12.13□□□□□ -0.47
VARS-228ENST00000495010 OR5J2Q8NH18 312 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 NFKBIDQ8NI38 313 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 CCL17Q92583 94 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 TMEM54Q969K7 222 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 ZNF566Q969W8 418 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 MOGAT1Q96PD6 335 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 GPA33Q99795 319 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
VARS-228ENST00000495010 UBAP1Q9NZ09 502 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 ZIM2Q9NZV7 527 aa12.13□□□□□ -0.47
VARS-228ENST00000495010 A0A0B4J2E0 115 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 A0A1B0GX12 115 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 PRORSD1PA6NEY8 169 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 LRRN3E7EW58 273 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 RNF13O43567 381 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 PRTN3P24158 256 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 GCH1P30793 250 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 APLNRP35414 380 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 ZNF81P51508 661 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 HHATQ5VTY9 493 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 REEP3Q6NUK4 255 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 PAQR4Q8N4S7 273 aaPredicted RBP12.12□□□□□ -0.47
VARS-228ENST00000495010 SIGLECL1Q8N7X8 197 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 GOLGA6L1Q8N7Z2 621 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 OR4K5Q8NGD3 323 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 TMEM43Q9BTV4 400 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 TMEM109Q9BVC6 243 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 UNKLQ9H9P5 680 aaKnown RBP12.12□□□□□ -0.47
VARS-228ENST00000495010 TMEM38BQ9NVV0 291 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
VARS-228ENST00000495010 PLSCR5A0PG75 271 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 DHHO43323 396 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 SPRY3O43610 288 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 FOXH1O75593 365 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 SNAP29O95721 258 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 ARAFP10398 606 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 BMP2P12643 396 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 CCNOP22674 350 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 ATP4BP51164 291 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 ZNF84P51523 738 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 CDH12P55289 794 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 HSF2Q03933 536 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 BAMBIQ13145 260 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 FAM209AQ5JX71 171 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 GCNT6Q5T4J0 391 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 NHLRC1Q6VVB1 395 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 WDR88Q6ZMY6 472 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 RBM15BQ8NDT2 890 aaKnown RBP12.11□□□□□ -0.47
VARS-228ENST00000495010 BHLHE22Q8NFJ8 381 aaPredicted RBP12.11□□□□□ -0.47
VARS-228ENST00000495010 POP5Q969H6 163 aaKnown RBP12.11□□□□□ -0.47
VARS-228ENST00000495010 DUX5Q96PT3 197 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 ZNF607Q96SK3 696 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 EGLN1Q9GZT9 426 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 KCNN2Q9H2S1 579 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 NUP50Q9UKX7 468 aa12.11□□□□□ -0.47
VARS-228ENST00000495010 UBDO15205 165 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 TPST1O60507 370 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 SERPINB7O75635 380 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 FSHBP01225 129 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 IGHV3-13P01766 116 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms