RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GOT1L1Q8NHS2 421 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-207ENST00000494090 UHRF2Q96PU4 802 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 SLC38A1Q9H2H9 487 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 FBXO8Q9NRD0 319 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 MED16Q9Y2X0 877 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF749O43361 778 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 CHRNB1P11230 501 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 IGFBP6P24592 240 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-207ENST00000494090 APOBEC1P41238 236 aaKnown RBP17.61■□□□□ 0.41
COL27A1-207ENST00000494090 CCR9P51686 369 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 EPHA5P54756 1037 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 SFRP5Q5T4F7 317 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 NKAIN4Q8IVV8 208 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 FBXL2Q9UKC9 423 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 KRBOX1C9JBD0 128 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 VAMP5O95183 116 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 ETV1P50549 477 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 HBG1P69891 147 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 HBG2P69892 147 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 ARHGAP11BQ3KRB8 267 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF511Q8NB15 262 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 ZAR1LA6NP61 321 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 POM121CA8CG34 1229 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 K7ESM1 405 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 ARRB2P32121 409 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 TBC1D28Q2M2D7 210 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 C1orf140Q5VVS0 124 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 H1FNTQ75WM6 255 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-207ENST00000494090 RPS19BP1Q86WX3 136 aaKnown RBP17.61■□□□□ 0.41
COL27A1-207ENST00000494090 TEAD3Q99594 435 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 SGPP1Q9BX95 441 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 C20orf85Q9H1P6 137 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 KCNIP2Q9NS61 270 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 K7EPK0 472 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 NUPL2O15504 423 aaKnown RBP17.6■□□□□ 0.41
COL27A1-207ENST00000494090 PRAMEF4O60810 478 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 TGM6O95932 706 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 THBS1P07996 1170 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF133P52736 654 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-207ENST00000494090 OXA1LQ15070 435 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 MEP1BQ16820 701 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 OVCH1Q7RTY7 1134 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 FAM71E2Q8N5Q1 922 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 PFN4Q8NHR9 129 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 RBMXL1Q96E39 390 aaKnown RBP17.6■□□□□ 0.41
COL27A1-207ENST00000494090 PLEKHM1Q9Y4G2 1056 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 LOC100289279A0A1B0GTE1 492 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 BET1O15155 118 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 NAGAP17050 411 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 RPS23P62266 143 aaKnown RBP17.6■□□□□ 0.41
COL27A1-207ENST00000494090 DUSP5Q16690 384 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 VHLLQ6RSH7 139 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 OR6M1Q8NGM8 313 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 FAM3DQ96BQ1 224 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 BOD1Q96IK1 185 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 C19orf43Q9BQ61 176 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 DECR2Q9NUI1 292 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 SLC23A2Q9UGH3 650 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 C19orf53Q9UNZ5 99 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-207ENST00000494090 E9PI62 339 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 BLVRBP30043 206 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-207ENST00000494090 CCR5P51681 352 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 ADPRHP54922 357 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 HTR4Q13639 388 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 CD276Q5ZPR3 534 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 ARPC5LQ9BPX5 153 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 NDUFB11Q9NX14 153 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 FADS1O60427 444 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 HEXAP06865 529 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 CPEP16870 476 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 PLA2G7Q13093 441 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 NKAIN2Q5VXU1 208 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 CYHR1Q6ZMK1 362 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 SLC37A2Q8TED4 501 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 MYO10Q9HD67 2058 aa17.6■□□□□ 0.41
COL27A1-207ENST00000494090 LCMT2O60294 686 aaKnown RBP17.59■□□□□ 0.41
COL27A1-207ENST00000494090 NXPH2O95156 264 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 HBE1P02100 147 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF385BQ569K4 471 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 C6orf15Q6UXA7 325 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-207ENST00000494090 Q6ZTK2 550 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 CADM3Q8N126 398 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 BBS1Q8NFJ9 593 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 SLC35B4Q969S0 331 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 RASD2Q96D21 266 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 MBNL1Q9NR56 388 aaKnown RBP17.59■□□□□ 0.41
COL27A1-207ENST00000494090 TRBV5-4A0A0C4DH59 114 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 NID1P14543 1247 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 CCR6P51684 374 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 NKAIN1Q4KMZ8 207 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 CNTNAP3Q9BZ76 1288 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 SELENOIQ9C0D9 397 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 MYO5AQ9Y4I1 1855 aaKnown RBP17.59■□□□□ 0.41
COL27A1-207ENST00000494090 SELENOFO60613 162 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 SELEP16581 610 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 CD1CP29017 333 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 IRS1P35568 1242 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 ACSM1Q08AH1 577 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 ASAH1Q13510 395 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms