RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 TEX46H3BTG2 121 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 DNASE2O00115 360 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 SULT1C2O00338 296 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 LCE2BO14633 110 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 PRKYO43930 277 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ERAL1O75616 437 aaKnown RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 SC5DO75845 299 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 FABP3P05413 133 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 FAM157BP0CG42 384 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ANXA8P13928 327 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 GDF1P27539 372 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 POU1F1P28069 291 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ABCD3P28288 659 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 LCN1P31025 176 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 CAPZA2P47755 286 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ZFP36L2P47974 494 aaKnown RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 DAPP51397 102 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 MAP4K2Q12851 820 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 MICBQ29980 383 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 TUSC1Q2TAM9 212 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 RNF212Q495C1 297 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 GGTA1PQ4G0N0 100 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ACSF3Q4G176 576 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 XKR7Q5GH72 579 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 NHLRC3Q5JS37 347 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 WIPI1Q5MNZ9 446 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 CLEC6AQ6EIG7 209 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 OR4F3Q6IEY1 312 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 RGS7BPQ6MZT1 257 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 SLC48A1Q6P1K1 146 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ENPP6Q6UWR7 440 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 DLEU7Q6UYE1 221 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 NPSR1Q6W5P4 371 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 YRDCQ86U90 279 aaKnown RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 CYP4Z1Q86W10 505 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 LAX1Q8IWV1 398 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 Q8N402 240 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 OR8D4Q8NGM9 314 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 TMEM163Q8TC26 289 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 APH1BQ8WW43 257 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 SELENOMQ8WWX9 145 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ACOT12Q8WYK0 555 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ST8SIA2Q92186 375 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 KAT2AQ92830 837 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 CTHRC1Q96CG8 243 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 APIPQ96GX9 242 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 C3orf30Q96M34 536 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ZNF583Q96ND8 569 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 TIMP4Q99727 224 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 C1QTNF3Q9BXJ4 246 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ANGPTL4Q9BY76 406 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ACPTQ9BZG2 426 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 DPAGT1Q9H3H5 408 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 EXO5Q9H790 373 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 GALNT9Q9HCQ5 603 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ACKR4Q9NPB9 350 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 EXOSC4Q9NPD3 245 aaKnown RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 UFSP2Q9NUQ7 469 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 C1orf109Q9NX04 203 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 SIRT5Q9NXA8 310 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 CNIH4Q9P003 139 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 EXTL2Q9UBQ6 330 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 ADAM29Q9UKF5 820 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 BOKQ9UMX3 212 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 CDH10Q9Y6N8 788 aa7.36□□□□□ -1.23
HDAC6-234ENST00000493923 NUP214P35658 2090 aaPredicted RBP7.36□□□□□ -1.23
HDAC6-234ENST00000493923 TLN2Q9Y4G6 2542 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 LINC00587B1AMM8 73 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 UBFD1O14562 309 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 PDCD5O14737 125 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 SGCEO43556 437 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 AKAP8O43823 692 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 EIF1BO60739 113 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 PRAF2O60831 178 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 WDR1O75083 606 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 TRAPPC6AO75865 159 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 CCNB2O95067 398 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 HPNP05981 417 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 IL3P08700 152 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 SPI1P17947 270 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 BMP7P18075 431 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 PTPN6P29350 595 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 CEACAM8P31997 349 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 GRK5P34947 590 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 EIF1P41567 113 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 EMDP50402 254 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 ZNF136P52737 540 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 FOXA1P55317 472 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 CDC42P60953 191 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 HMGCS1Q01581 520 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 MLLT11Q13015 90 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 BIKQ13323 160 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 OPCMLQ14982 345 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 FCN2Q15485 313 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 CDNFQ49AH0 187 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 SPIN4Q56A73 249 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 ZNF628Q5EBL2 1059 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 RIPPLY2Q5TAB7 128 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 VASNQ6EMK4 673 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms