RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TMPRSS11FQ6ZWK6 438 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 CDK20Q8IZL9 346 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 NUP37Q8NFH4 326 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 IL17RDQ8NFM7 739 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 OR4F15Q8NGB8 312 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 SLC7A13Q8TCU3 470 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 PYURFQ96I23 114 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 COX4I2Q96KJ9 171 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 DHRS1Q96LJ7 313 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 CACNG6Q9BXT2 260 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 BARX1Q9HBU1 254 aaPredicted RBP19.65■□□□□ 0.74
SNIP1-203ENST00000493916 NOX3Q9HBY0 568 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 TMEM38BQ9NVV0 291 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 ACANP16112 2415 aa19.65■□□□□ 0.74
SNIP1-203ENST00000493916 UBL3O95164 117 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 IGHV4-39P01824 125 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 CD79AP11912 226 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 ITGA2P17301 1181 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 NPRL3Q12980 569 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 BIVMQ86UB2 503 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 OAFQ86UD1 273 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 SLC22A24Q8N4F4 322 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 LRRC75AQ8NAA5 344 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 MCHR2Q969V1 340 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 NSMCE2Q96MF7 247 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 ZNF75AQ96N20 296 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 ZNF347Q96SE7 839 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 CA10Q9NS85 328 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 FBXL3Q9UKT7 428 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 TMEM5Q9Y2B1 443 aa19.64■□□□□ 0.73
SNIP1-203ENST00000493916 USF3Q68DE3 2245 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 ALPK2Q86TB3 2170 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 TRAV27A0A087WT01 109 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 IGHV2OR16-5A0A0B4J2B6 119 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 TRIM64A6NGJ6 449 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 TRIM64BA6NI03 449 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 H7C417 338 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 hCG_2039718K7EN88 272 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 PDE5AO76074 875 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 INHBBP09529 407 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 OR8G3PP0DMU2 310 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 NR2C1P13056 603 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 ZNF14P17017 642 aaPredicted RBP19.63■□□□□ 0.73
SNIP1-203ENST00000493916 MSX2P35548 267 aaPredicted RBP19.63■□□□□ 0.73
SNIP1-203ENST00000493916 IQCCQ4KMZ1 466 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 C10orf128Q5T292 105 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 FAM205BPQ63HN1 556 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 PODNL1Q6PEZ8 512 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 RRM2BQ7LG56 351 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 MEX3DQ86XN8 651 aaKnown RBP19.63■□□□□ 0.73
SNIP1-203ENST00000493916 SKA3Q8IX90 412 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 SYT14Q8NB59 555 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 OR13C2Q8NGS9 318 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 OR51A7Q8NH64 312 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 NMD3Q96D46 503 aaKnown RBP19.63■□□□□ 0.73
SNIP1-203ENST00000493916 NSL1Q96IY1 281 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 SMURF2Q9HAU4 748 aa19.63■□□□□ 0.73
SNIP1-203ENST00000493916 H7C1Q1 480 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 CDC42EP2O14613 210 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 BMP4P12644 408 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 GPR4P46093 362 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 ZNF84P51523 738 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 RPL27P61353 136 aaKnown RBP19.62■□□□□ 0.73
SNIP1-203ENST00000493916 CHRNB3Q05901 458 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 PIGFQ07326 219 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 CLEC12BQ2HXU8 276 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 DPPA2Q7Z7J5 298 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 ARHGAP24Q8N264 748 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 HDAC2Q92769 488 aaKnown RBP19.62■□□□□ 0.73
SNIP1-203ENST00000493916 TNFRSF13CQ96RJ3 184 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 KCNK17Q96T54 332 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 ALG12Q9BV10 488 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 GDF2Q9UK05 429 aaPredicted RBP19.62■□□□□ 0.73
SNIP1-203ENST00000493916 ADAM21Q9UKJ8 722 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 V9GYQ6 96 aa19.62■□□□□ 0.73
SNIP1-203ENST00000493916 B2RBV5 119 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 FARS2O95363 451 aaKnown RBP19.61■□□□□ 0.73
SNIP1-203ENST00000493916 RAB36O95755 333 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 CALB2P22676 271 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 PTDSS1P48651 473 aaKnown RBP19.61■□□□□ 0.73
SNIP1-203ENST00000493916 CTXN1P60606 82 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 RAB1AP62820 205 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 MYBPC1Q00872 1141 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 HGFACQ04756 655 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 TOP3AQ13472 1001 aaPredicted RBP19.61■□□□□ 0.73
SNIP1-203ENST00000493916 SWI5Q1ZZU3 235 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 MST1LQ2TV78 715 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 FGD3Q5JSP0 725 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 DNM1P46Q6ZS02 220 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 CIARTQ8N365 385 aaPredicted RBP19.61■□□□□ 0.73
SNIP1-203ENST00000493916 ZNF519Q8TB69 540 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 TSPAN32Q96QS1 320 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 FUZQ9BT04 418 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 ZNF442Q9H7R0 627 aa19.61■□□□□ 0.73
SNIP1-203ENST00000493916 A6NIZ1 184 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 MGRN1O60291 552 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 NDUFS7O75251 213 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 SERPINF1P36955 418 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 LIMS1P48059 325 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 GIPRP48546 466 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms