RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 MSH6P52701 1360 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 CEMIPQ8WUJ3 1361 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 LRP4O75096 1905 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 TRAV39A0A0B4J263 110 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 BTBD17A6NE02 478 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 XKRYO14609 159 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 PALMO75781 387 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 CST1P01037 141 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 CRYGBP07316 175 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 SLC2A3P11169 496 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 ZNF43P17038 809 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 MAGP20916 626 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 RDXP35241 583 aaKnown RBP2.16□□□□□ -2.06
SMC4-223ENST00000493695 ZNF92Q03936 586 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 KPRPQ5T749 579 aaPredicted RBP2.16□□□□□ -2.06
SMC4-223ENST00000493695 ZFP2Q6ZN57 461 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 LRRC74BQ6ZQY2 392 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 PUSL1Q8N0Z8 303 aaKnown RBP2.16□□□□□ -2.06
SMC4-223ENST00000493695 STPG2Q8N412 459 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 TMEM54Q969K7 222 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 SGK3Q96BR1 496 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 OSBPL10Q9BXB5 764 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 TMEM59Q9BXS4 323 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 ETNK2Q9NVF9 386 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 DEC1Q9P2X7 70 aa2.16□□□□□ -2.06
SMC4-223ENST00000493695 PRSS37A4D1T9 235 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 ARHGEF35A5YM69 484 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 H0YHG0 523 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 TMX2-CTNND1H3BSU7 103 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 MRPS12O15235 138 aaKnown RBP2.15□□□□□ -2.07
SMC4-223ENST00000493695 CD5LO43866 347 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 EIF3GO75821 320 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMC4-223ENST00000493695 IGLV3-19P01714 112 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 RORAP35398 523 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 RFX3P48380 749 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 TPMTP51580 245 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 GPX6P59796 221 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 KCNJ2P63252 427 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 LY6EQ16553 131 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 TTLL9Q3SXZ7 439 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 PRAMEF5Q5TYX0 476 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 PRAMEF6Q5VXH4 476 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 CNIH2Q6PI25 160 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 Q6ZSR3 168 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 FAM43BQ6ZT52 329 aaPredicted RBP2.15□□□□□ -2.07
SMC4-223ENST00000493695 LINC00173Q6ZV60 143 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 PCP2Q8IVA1 136 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 PIBF1Q8WXW3 757 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 CEP170P1Q96L14 293 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 HSFY1Q96LI6 401 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 TSSK3Q96PN8 268 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 TAAR1Q96RJ0 339 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 RARRES2Q99969 163 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 METTL7AQ9H8H3 244 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 PCYOX1Q9UHG3 505 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 IKZF2Q9UKS7 526 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 NFASCO94856 1347 aa2.15□□□□□ -2.07
SMC4-223ENST00000493695 SLIT3O75094 1523 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 C11orf94C9JXX5 98 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 H0Y8G0 127 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 SERPINA3P01011 423 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 RETP07949 1114 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 MCF2P10911 925 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 FOLR1P15328 257 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 IGFBP3P17936 291 aaPredicted RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 ATP5C1P36542 298 aaKnown RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 SULT1E1P49888 294 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 MNAT1P51948 309 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 NCBP2P52298 156 aaKnown RBP eCLIP2.14□□□□□ -2.07
SMC4-223ENST00000493695 SMARCB1Q12824 385 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 PON3Q15166 354 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 DUX4L9Q6RFH8 374 aaPredicted RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 MS4A15Q8N5U1 240 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 HSD17B11Q8NBQ5 300 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 OR9K2Q8NGE7 335 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 OR2G2Q8NGZ5 317 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 PLPPR1Q8TBJ4 325 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 LKAAEAR1Q8TD35 194 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 ZFP90Q8TF47 636 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 FBXO32Q969P5 355 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 EXOSC8Q96B26 276 aaKnown RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 CHAC1Q9BUX1 264 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 MRPL37Q9BZE1 423 aaKnown RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 RACGAP1Q9H0H5 632 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 IFI27L2Q9H2X8 130 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 RPP21Q9H633 154 aaKnown RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 CWH43Q9H720 699 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 SLCO1B3Q9NPD5 702 aa2.14□□□□□ -2.07
SMC4-223ENST00000493695 CSDC2Q9Y534 153 aaKnown RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 MN1Q10571 1320 aaPredicted RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 CENPJQ9HC77 1338 aaPredicted RBP2.14□□□□□ -2.07
SMC4-223ENST00000493695 DHX57Q6P158 1386 aaKnown RBP2.13□□□□□ -2.07
SMC4-223ENST00000493695 A0A0B4J2A0 478 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 PSTPIP1O43586 416 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 ANGPTL7O43827 346 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 AIREO43918 545 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 SOX15O60248 233 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 MED6O75586 246 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 TLX1NBP0CAT3 122 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 CASP14P31944 242 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms