RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	SLC7A8	Q9UHI5	535 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	CPSF4L	A6NMK7	179 aa	Known RBP	13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	LYNX1	G3V0Z9	82 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	HAX1	O00165	279 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	SHOX2	O60902	331 aa	Predicted RBP	13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	OPN1SW	P03999	348 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	LYNX1	P0DP58	116 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	ALDH3B1	P43353	468 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	RAB39A	Q14964	217 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF74	Q16587	644 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	FXN	Q16595	210 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	DUSP7	Q16829	419 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	ENTPD8	Q5MY95	495 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	TTC33	Q6PID6	262 aa	Predicted RBP	13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	LINC00114	Q6XXX2	140 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC35D2	Q76EJ3	337 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	CALHM3	Q86XJ0	350 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	OR6T1	Q8NGN1	323 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	OR6X1	Q8NH79	312 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	TMEM54	Q969K7	222 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	RCN3	Q96D15	328 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	C1orf159	Q96HA4	380 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	SH3GL1	Q99961	368 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	NANS	Q9NR45	359 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170	GID8	Q9NWU2	228 aa		13.19	□□□□□ -0.3
MRPL55-231	ENST00000492170		A0A1W2PPW3	197 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	RNF13	O43567	381 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	TCF21	O43680	179 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	CH25H	O95992	272 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	SERPINA5	P05154	406 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	OR8G3P	P0DMU2	310 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	TCN1	P20061	433 aa	Predicted RBP	13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	ACHE	P22303	614 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	PRDX6	P30041	224 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	PCGF2	P35227	344 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	GPR6	P46095	362 aa	Predicted RBP	13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	DVL1P1	P54792	670 aa	Predicted RBP	13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZP4	Q12836	540 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	RABL3	Q5HYI8	236 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	ELFN2	Q5R3F8	820 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	WDR88	Q6ZMY6	472 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC30A8	Q8IWU4	369 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC22A24	Q8N4F4	322 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	GPR32P1	Q8NGA4	272 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	OR10A6	Q8NH74	314 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	ADAMTS16	Q8TE57	1224 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	RDH5	Q92781	318 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF566	Q969W8	418 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC25A44	Q96H78	314 aa	Predicted RBP	13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF346	Q9UL40	294 aa	Known RBP	13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	FZR1	Q9UM11	496 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	ARL2BP	Q9Y2Y0	163 aa		13.18	□□□□□ -0.3
MRPL55-231	ENST00000492170	TRAPPC13	A5PLN9	417 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170		B4DSR2	109 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170		M0QX08	132 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	FARS2	O95363	451 aa	Known RBP	13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	HPX	P02790	462 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	HIST1H2AB	P04908	130 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	PATE4	P0C8F1	98 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	SAG	P10523	405 aa	Predicted RBP	13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	UMPS	P11172	480 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	SELENOV	P59797	346 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	MELK	Q14680	651 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	NPTX1	Q15818	432 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	HACD2	Q6Y1H2	254 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	RINL	Q6ZS11	566 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	HIST3H2A	Q7L7L0	130 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	PATL1	Q86TB9	770 aa	Known RBP	13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	GLCCI1	Q86VQ1	547 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	LRP11	Q86VZ4	500 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	SKA3	Q8IX90	412 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC26A7	Q8TE54	656 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	HIST1H2AC	Q93077	130 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	CMTM5	Q96DZ9	223 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	MPP4	Q96JB8	637 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	CCT8L2	Q96SF2	557 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC19A3	Q9BZV2	496 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	TMEM38B	Q9NVV0	291 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	MYEF2	Q9P2K5	600 aa	Known RBP	13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	DUSP13	Q9UII6	198 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF229	Q9UJW7	825 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC7A7	Q9UM01	511 aa		13.17	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC22A23	A1A5C7	686 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	KPNA4	O00629	521 aa	Predicted RBP	13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	DHH	O43323	396 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	FAM107A	O95990	144 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	IGHG1	P01857	330 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	TF	P02787	698 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	CD247	P20963	164 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	MRPS11	P82912	194 aa	Known RBP	13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	NKPD1	Q17RQ9	610 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	VMAC	Q2NL98	169 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	INTS11	Q5TA45	600 aa	Known RBP	13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	TMEM53	Q6P2H8	277 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	NANOGNB	Q7Z5D8	188 aa		13.16	□□□□□ -0.3

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