RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SPC24Q8NBT2 197 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 ZNRF1Q8ND25 227 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 MAIP1Q8WWC4 291 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 VPS33AQ96AX1 596 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 CABS1Q96KC9 395 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 CNDP1Q96KN2 507 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 IMMP1LQ96LU5 166 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 PRAP1Q96NZ9 151 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 CYTH2Q99418 400 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 NAA11Q9BSU3 229 aaPredicted RBP2.38□□□□□ -2.03
PHC3-213ENST00000491258 ZNF160Q9HCG1 818 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 MRPS30Q9NP92 439 aaKnown RBP2.38□□□□□ -2.03
PHC3-213ENST00000491258 FAM114A2Q9NRY5 505 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 HOMER3Q9NSC5 361 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 C14orf105Q9NVL8 296 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 STMN3Q9NZ72 180 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 TRPC4Q9UBN4 977 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 UBQLN2Q9UHD9 624 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 TAC3Q9UHF0 121 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 ENTPD4Q9Y227 616 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 DHRS7Q9Y394 339 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 MRPS2Q9Y399 296 aaKnown RBP2.38□□□□□ -2.03
PHC3-213ENST00000491258 LIPGQ9Y5X9 500 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 NF1P21359 2839 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 MIA3Q5JRA6 1907 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 NOTCH1P46531 2555 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 COL12A1Q99715 3063 aa2.38□□□□□ -2.03
PHC3-213ENST00000491258 ANK1P16157 1881 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 SPENQ96T58 3664 aaKnown RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 FLNCQ14315 2725 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 USP9YO00507 2555 aaPredicted RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 ATMQ13315 3056 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 GREB1Q4ZG55 1949 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 NBEAL2Q6ZNJ1 2754 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 A0A1B0GUH1 482 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 FRG2CA6NGY1 282 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 A8MUI8 341 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 E5RI56 91 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 H0YIG0 161 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 GOLGA8MH3BSY2 632 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 SGK494L7N484 410 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 SAP18O00422 153 aaKnown RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 TXNDC9O14530 226 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 P2RX6O15547 441 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 ZBTB14O43829 449 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 LCMT2O60294 686 aaKnown RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 DNAJB6O75190 326 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 VPS26AO75436 327 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 NSA2O95478 260 aaKnown RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 TSPAN12O95859 305 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 F10P00742 488 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 IGHG3P01860 377 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 KRT14P02533 472 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 STATHP02808 62 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 ANXA5P08758 320 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 MPC1LP0DKB6 136 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 C8orf89P0DMQ9 161 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 SPP1P10451 314 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 CPN1P15169 458 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 CXCR2P25025 360 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 IVDP26440 423 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 IMPA1P29218 277 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 COILP38432 576 aaPredicted RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 SLC1A2P43004 574 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 RAD52P43351 418 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 XCR1P46094 333 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 TDGF1P3P51864 188 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 CDKN2DP55273 166 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 KCNK10P57789 538 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 RPS15AP62244 130 aaKnown RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 CSNK1G2P78368 415 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 ARG2P78540 354 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 CXCL6P80162 114 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 SARNPP82979 210 aaKnown RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 ART3Q13508 389 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 CUL1Q13616 776 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 TSTA3Q13630 321 aaPredicted RBP2.37□□□□□ -2.03
PHC3-213ENST00000491258 PTK6Q13882 451 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 RASA2Q15283 850 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 INAQ16352 499 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 NDUFA9Q16795 377 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 C17orf58Q2M2W7 97 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 TTLL9Q3SXZ7 439 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 FAM174BQ3ZCQ3 159 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 HSP90AA5PQ58FG0 334 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 KRBOX4Q5JUW0 171 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 ACER2Q5QJU3 275 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.37□□□□□ -2.03
PHC3-213ENST00000491258 ZNF470Q6ECI4 717 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 H3F3CQ6NXT2 135 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 CASC4Q6P4E1 433 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 PRSS41Q7RTY9 318 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 ANKRD37Q7Z713 158 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 PCGF5Q86SE9 256 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 LRRC8AQ8IWT6 810 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 RNF175Q8N4F7 328 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 OTUD6BQ8N6M0 293 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 ZNF781Q8N8C0 355 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 NAT8LQ8N9F0 302 aa2.37□□□□□ -2.03
PHC3-213ENST00000491258 MFSD9Q8NBP5 474 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms