RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 UEVLDQ8IX04 471 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 MDS2Q8NDY4 140 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 KLHL15Q96M94 604 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF385AQ96PM9 386 aaKnown RBP12.43□□□□□ -0.42
SMPD4-219ENST00000491128 GNG8Q9UK08 70 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 BOKQ9UMX3 212 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-219ENST00000491128 POLHQ9Y253 713 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 LIPGQ9Y5X9 500 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 DSPP15924 2871 aaKnown RBP12.43□□□□□ -0.42
SMPD4-219ENST00000491128 A0A1B0GTH9 108 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 IRGMA1A4Y4 181 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 RPP14O95059 124 aaKnown RBP12.43□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF43P17038 809 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 POU3F2P20265 443 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-219ENST00000491128 SLC3A1Q07837 685 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 MLLT11Q13015 90 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-219ENST00000491128 LSAMPQ13449 338 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 EMC4Q5J8M3 183 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 ARL9Q6T311 187 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 PXKQ7Z7A4 578 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 GGNQ86UU5 652 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 SCAIQ8N9R8 606 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 OR2T4Q8NH00 348 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 SLC25A43Q8WUT9 341 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-219ENST00000491128 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 SNX33Q8WV41 574 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 ZHX1-C8orf76Q96EF9 292 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 TPK1Q9H3S4 243 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 ACOXLQ9NUZ1 547 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 HAO2Q9NYQ3 351 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 KCNG2Q9UJ96 466 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 HDGFL3Q9Y3E1 203 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 CHD8Q9HCK8 2581 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF701M0R085 212 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-219ENST00000491128 M0R3G1 203 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 WNT11O96014 354 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 CDAP32320 146 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 CRYBB2P43320 205 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 CLDN17P56750 224 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 MFSD13AQ14CX5 517 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF766Q5HY98 468 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 RNLSQ5VYX0 342 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 HBMQ6B0K9 141 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 C22orf42Q6IC83 251 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 IGF2-ASQ6U949 168 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 TIGD4Q8IY51 512 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 OR13C5Q8NGS8 318 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 KCNE4Q8WWG9 221 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 MRPL22Q9NWU5 206 aaKnown RBP12.42□□□□□ -0.42
SMPD4-219ENST00000491128 CD8B2A6NJW9 211 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 AQP7P3A6NL99 342 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 TRAF3IP2O43734 574 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-219ENST00000491128 CD8BP10966 210 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 SLC25A1P53007 311 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 CARD18P57730 90 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 PPIAP62937 165 aaKnown RBP12.42□□□□□ -0.42
SMPD4-219ENST00000491128 CORO6Q6QEF8 472 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 LINC00346Q8IVM7 164 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 OR10D3Q8NH80 312 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
SMPD4-219ENST00000491128 NDEL1Q9GZM8 345 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 DCSTAMPQ9H295 470 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 BABAM2Q9NXR7 383 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 KCNMB2Q9Y691 235 aa12.42□□□□□ -0.42
SMPD4-219ENST00000491128 PIEZO1Q92508 2521 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 A0A1W2PPK0 400 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF593O00488 134 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-219ENST00000491128 NME2P1O60361 137 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 OR8G3PP0DMU2 310 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 CPEP16870 476 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 NME2P22392 152 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 NTF4P34130 210 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 EIF2S3P41091 472 aaKnown RBP12.41□□□□□ -0.42
SMPD4-219ENST00000491128 MAGEB1P43366 347 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 SERPINB10P48595 397 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 MAP2K6P52564 334 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 SLC35A1P78382 337 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 FABP5Q01469 135 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 ZP4Q12836 540 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 ODF4Q2M2E3 257 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 CRTC2Q53ET0 693 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-219ENST00000491128 LCN1P1Q5VSP4 162 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 NHLRC1Q6VVB1 395 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 TMPRSS11AQ6ZMR5 421 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 GPALPP1Q8IXQ4 340 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 UFD1Q92890 307 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 NDUFB11Q9NX14 153 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 LUZP4Q9P127 313 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 CAB39Q9Y376 341 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-219ENST00000491128 PMF1-BGLAPU3KQ54 211 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 IGLV1-36A0A0B4J1U3 117 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 SMAD9O15198 467 aaKnown RBP12.41□□□□□ -0.42
SMPD4-219ENST00000491128 SPARCP09486 303 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 PSMA1P25786 263 aaKnown RBP12.41□□□□□ -0.42
SMPD4-219ENST00000491128 DAP3P51398 398 aaKnown RBP12.41□□□□□ -0.42
SMPD4-219ENST00000491128 GFRA1P56159 465 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 H3F3AP84243 136 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms