RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ATP5IP56385 69 aaPredicted RBP2.42□□□□□ -2.02
CD46-216ENST00000490278 ACTA1P68133 377 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 ZNF92Q03936 586 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 TGFBIQ15582 683 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 KRTAP13-3Q3SY46 172 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 OR52W1Q6IF63 320 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 C19orf35Q6ZS72 473 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 LINC00173Q6ZV60 143 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 NANOGNBQ7Z5D8 188 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 C12orf56Q8IXR9 622 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 SAXO1Q8IYX7 474 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 MREGQ8N565 214 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 CEP112Q8N8E3 955 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 Q8N976 141 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 TMEM54Q969K7 222 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 EXOSC8Q96B26 276 aaKnown RBP2.42□□□□□ -2.02
CD46-216ENST00000490278 PKIBQ9C010 78 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 PATZ1Q9HBE1 687 aaKnown RBP2.42□□□□□ -2.02
CD46-216ENST00000490278 LHX9Q9NQ69 397 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 ETNK2Q9NVF9 386 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 SLC2A8Q9NY64 477 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 SHPKQ9UHJ6 478 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 HPCAL4Q9UM19 191 aa2.42□□□□□ -2.02
CD46-216ENST00000490278 IGKV2D-24A0A075B6R9 120 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 RSPH10B2B2RC85 870 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 DLGAP1O14490 977 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 DFNA5O60443 496 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 SPAG7O75391 227 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 PALMO75781 387 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 CST1P01037 141 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 CT62P0C5K7 136 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 RSPH10BP0C881 870 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 AK4P27144 223 aaPredicted RBP2.41□□□□□ -2.02
CD46-216ENST00000490278 SERPINB5P36952 375 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 NCBP2P52298 156 aaKnown RBP eCLIP2.41□□□□□ -2.02
CD46-216ENST00000490278 GPX6P59796 221 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 PFN3P60673 137 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 MRPS22P82650 360 aaKnown RBP2.41□□□□□ -2.02
CD46-216ENST00000490278 HMGN5P82970 282 aaKnown RBP2.41□□□□□ -2.02
CD46-216ENST00000490278 ENPEPQ07075 957 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 ZNF691Q5VV52 312 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 CCDC73Q6ZRK6 1079 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 TMEM179Q6ZVK1 233 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 PLPPR1Q8TBJ4 325 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 PIBF1Q8WXW3 757 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 STARD8Q92502 1023 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 TPD52L3Q96J77 140 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 CD84Q9UIB8 345 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 NUP50Q9UKX7 468 aa2.41□□□□□ -2.02
CD46-216ENST00000490278 CENPJQ9HC77 1338 aaPredicted RBP2.41□□□□□ -2.02
CD46-216ENST00000490278 TRAV39A0A0B4J263 110 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 CIB4A0PJX0 185 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 PPP1R2P9O14990 202 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 KMOO15229 486 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 ANGPTL7O43827 346 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 C6orf47O95873 294 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 IGHDP01880 384 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 FGGP02679 453 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 TNNI1P19237 187 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 CHMLP26374 656 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 HNRNPH3P31942 346 aaKnown RBP2.4□□□□□ -2.03
CD46-216ENST00000490278 RPS9P46781 194 aaKnown RBP2.4□□□□□ -2.03
CD46-216ENST00000490278 SLC7A9P82251 487 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 PRPSAP1Q14558 356 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 PTGES3Q15185 160 aaKnown RBP2.4□□□□□ -2.03
CD46-216ENST00000490278 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 RABL6Q3YEC7 729 aaPredicted RBP2.4□□□□□ -2.03
CD46-216ENST00000490278 VAX1Q5SQQ9 334 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 RNASEKQ6P5S7 137 aaKnown RBP2.4□□□□□ -2.03
CD46-216ENST00000490278 TMEM107Q6UX40 140 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 STRADAQ7RTN6 431 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 CDR2LQ86X02 465 aaPredicted RBP2.4□□□□□ -2.03
CD46-216ENST00000490278 HSD17B11Q8NBQ5 300 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 SPATA4Q8NEY3 305 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 KCNG3Q8TAE7 436 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 RHEBL1Q8TAI7 183 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 SLC2A14Q8TDB8 520 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 ZFP90Q8TF47 636 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 BMFQ96LC9 184 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 FOPNLQ96NB1 174 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 P2RX4Q99571 388 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 LINC00597Q9H2U6 94 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 PSMC3IPQ9P2W1 217 aaPredicted RBP2.4□□□□□ -2.03
CD46-216ENST00000490278 PISDQ9UG56 409 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 KIAA1257Q9ULG3 409 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 IKBKGQ9Y6K9 419 aa2.4□□□□□ -2.03
CD46-216ENST00000490278 WDR62O43379 1518 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 HIDE1A8MVS5 230 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 AIREO43918 545 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 ZNF324O75467 553 aaPredicted RBP2.39□□□□□ -2.03
CD46-216ENST00000490278 MED6O75586 246 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 CDKN1BP46527 198 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 RFX3P48380 749 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 C16orf72Q14CZ0 275 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 PON3Q15166 354 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 PPP1R7Q15435 360 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 KHDRBS2Q5VWX1 349 aaKnown RBP2.39□□□□□ -2.03
CD46-216ENST00000490278 ZNF493Q6ZR52 646 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms