RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HFEQ30201 348 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 ALKBH6Q3KRA9 238 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 RPS26P11Q5JNZ5 115 aaPredicted RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 FAM91A1Q658Y4 838 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 USP51Q70EK9 711 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 PXKQ7Z7A4 578 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 DPPA2Q7Z7J5 298 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 TREML1Q86YW5 311 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 NUDCD3Q8IVD9 361 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 SKA3Q8IX90 412 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 SLC22A24Q8N4F4 322 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 PAQR4Q8N4S7 273 aaPredicted RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 DEFB108BQ8NET1 73 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 SLC30A7Q8NEW0 376 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 OR6N1Q8NGY5 312 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 FGFBP3Q8TAT2 258 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP39-216ENST00000490193 C11orf40Q8WZ69 217 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 ELMOD3Q96FG2 381 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 TXNDC15Q96J42 360 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 SORT1Q99523 831 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 GAL3ST1Q99999 423 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 BCL2L14Q9BZR8 327 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 C20orf27Q9GZN8 174 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 SAP30LQ9HAJ7 183 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 TPT1P8Q9HAU6 139 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 CACYBPQ9HB71 228 aaKnown RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 MED29Q9NX70 200 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 MRPL39Q9NYK5 338 aaKnown RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 ARMCX1Q9P291 453 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 RPS6KB2Q9UBS0 482 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 LEF1Q9UJU2 399 aaPredicted RBP6.95□□□□□ -1.3
USP39-216ENST00000490193 NUP50Q9UKX7 468 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 ZNF281Q9Y2X9 895 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 MMP24Q9Y5R2 645 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 GPR45Q9Y5Y3 372 aa6.95□□□□□ -1.3
USP39-216ENST00000490193 TMEM247A6NEH6 219 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 ZNF726A6NNF4 738 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 TM9SF1O15321 606 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 BIRC5O15392 142 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 FOXH1O75593 365 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 UBOX5O94941 541 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 MT-ND5P03915 603 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 IL6P05231 212 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 PATE4P0C8F1 98 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 FAM157BP0CG42 384 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 OR8G3PP0DMU2 310 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 GCH1P30793 250 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 PRKAR1BP31321 381 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 CSNK1A1P48729 337 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 MMP15P51511 669 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 UCP2P55851 309 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 LCN2P80188 198 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 RBBP4Q09028 425 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 PMS2P3Q13401 168 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 NRN1LQ496H8 165 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 ALG10BQ5I7T1 473 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 KLF17Q5JT82 389 aaPredicted RBP6.94□□□□□ -1.3
USP39-216ENST00000490193 ULK3Q6PHR2 472 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 WDR88Q6ZMY6 472 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 MSANTD1Q6ZTZ1 278 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 BBS10Q8TAM1 723 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 TMEM54Q969K7 222 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 SLC25A28Q96A46 364 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 TRIM44Q96DX7 344 aaPredicted RBP6.94□□□□□ -1.3
USP39-216ENST00000490193 SLC47A1Q96FL8 570 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 ZNF48Q96MX3 618 aaPredicted RBP6.94□□□□□ -1.3
USP39-216ENST00000490193 MOGAT1Q96PD6 335 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 EPYCQ99645 322 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 TMEM43Q9BTV4 400 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 C1QTNF5Q9BXJ0 243 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 ASPNQ9BXN1 380 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 RSPO3Q9BXY4 272 aaPredicted RBP6.94□□□□□ -1.3
USP39-216ENST00000490193 NUF2Q9BZD4 464 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 A4GALTQ9NPC4 353 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 DECR2Q9NUI1 292 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 TMEM38BQ9NVV0 291 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 GLTPQ9NZD2 209 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 ZNF69Q9UC07 566 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 TESQ9UGI8 421 aaKnown RBP6.94□□□□□ -1.3
USP39-216ENST00000490193 PURGQ9UJV8 347 aaKnown RBP6.94□□□□□ -1.3
USP39-216ENST00000490193 CACNG2Q9Y698 323 aa6.94□□□□□ -1.3
USP39-216ENST00000490193 A8MXK9 166 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 PLPP3O14495 311 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 SDHDO14521 159 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 MGRN1O60291 552 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 ZNF500O60304 480 aaPredicted RBP6.93□□□□□ -1.3
USP39-216ENST00000490193 MT-ATP6P00846 226 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 PTHP01270 115 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 IGHV1-46P01743 117 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 IGHMP01871 453 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 ETS2P15036 469 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 ZNF12P17014 697 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 MAKP20794 623 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 CBLP22681 906 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 ZFP36P26651 326 aaKnown RBP6.93□□□□□ -1.3
USP39-216ENST00000490193 SLC1A6P48664 564 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 ZNF81P51508 661 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 NME5P56597 212 aa6.93□□□□□ -1.3
USP39-216ENST00000490193 ERVS71-1P61550 626 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms