RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
VARS-227ENST00000489979 SH3GL3Q99963 347 aa11.85□□□□□ -0.51
VARS-227ENST00000489979 ROPN1BQ9BZX4 212 aaPredicted RBP11.85□□□□□ -0.51
VARS-227ENST00000489979 ROPN1Q9HAT0 212 aaPredicted RBP11.85□□□□□ -0.51
VARS-227ENST00000489979 UBAP1Q9NZ09 502 aa11.85□□□□□ -0.51
VARS-227ENST00000489979 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
VARS-227ENST00000489979 ZNF69Q9UC07 566 aa11.85□□□□□ -0.51
VARS-227ENST00000489979 ISPDA4D126 451 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 C11orf98E9PRG8 122 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 MT-ND5P03915 603 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 DRD4P21917 467 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 PRKAR1BP31321 381 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 UCP2P55851 309 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 IL13RA1P78552 427 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 BAMBIQ13145 260 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 TBC1D28Q2M2D7 210 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 ARMCX4Q5H9R4 360 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 TMEM53Q6P2H8 277 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 BCL6BQ8N143 479 aaPredicted RBP11.84□□□□□ -0.51
VARS-227ENST00000489979 DEFB108BQ8NET1 73 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
VARS-227ENST00000489979 POP5Q969H6 163 aaKnown RBP11.84□□□□□ -0.51
VARS-227ENST00000489979 ZNF48Q96MX3 618 aaPredicted RBP11.84□□□□□ -0.51
VARS-227ENST00000489979 BCL2L14Q9BZR8 327 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 WDR55Q9H6Y2 383 aaPredicted RBP11.84□□□□□ -0.51
VARS-227ENST00000489979 RNF121Q9H920 327 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 ZMAT3Q9HA38 289 aaKnown RBP11.84□□□□□ -0.51
VARS-227ENST00000489979 A4GALTQ9NPC4 353 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 TMEM38BQ9NVV0 291 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 SELENONQ9NZV5 590 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
VARS-227ENST00000489979 NUP50Q9UKX7 468 aa11.84□□□□□ -0.51
VARS-227ENST00000489979 POM121CA8CG34 1229 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 C5orf58C9J3I9 102 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 SPRY3O43610 288 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 ENTPD5O75356 428 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 SLC22A3O75751 556 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 FARS2O95363 451 aaKnown RBP11.83□□□□□ -0.52
VARS-227ENST00000489979 SNAP29O95721 258 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 ADORA3P0DMS8 318 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 EPHA3P29320 983 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 ATP4BP51164 291 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 ZNF81P51508 661 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 STX3Q13277 289 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 RGNQ15493 299 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 OR1Q1Q15612 314 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 MOGQ16653 247 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 FAM209AQ5JX71 171 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 C6orf10Q5SRN2 563 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 LRFN4Q6PJG9 635 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 OR1J2Q8NGS2 313 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 ST7LQ8TDW4 575 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.83□□□□□ -0.52
VARS-227ENST00000489979 ITCHQ96J02 903 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 GPA33Q99795 319 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 C1orf198Q9H425 327 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 RMND5AQ9H871 391 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 TMEM27Q9HBJ8 222 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 TCF7L2Q9NQB0 619 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 MMP26Q9NRE1 261 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 PLEK2Q9NYT0 353 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 TANC2Q9HCD6 1990 aa11.83□□□□□ -0.52
VARS-227ENST00000489979 NOTCH1P46531 2555 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 PPIAL4EA0A075B759 164 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 PPIAL4CA0A0B4J2A2 164 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 A0A0B4J2E0 115 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 A0A1B0GX12 115 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 PPIAL4DF5H284 164 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 DHHO43323 396 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 TPST1O60507 370 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 FOXH1O75593 365 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 UBOX5O94941 541 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 PTHP01270 115 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 IGHV1-46P01743 117 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
VARS-227ENST00000489979 PPIAL4FP0DN26 164 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 BMP2P12643 396 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 ETS2P15036 469 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 NCALDP61601 193 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 HNRNPA0Q13151 305 aaKnown RBP11.82□□□□□ -0.52
VARS-227ENST00000489979 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
VARS-227ENST00000489979 DHRS4L2Q6PKH6 230 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 SLC35D2Q76EJ3 337 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 SLC16A14Q7RTX9 510 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 OR4K5Q8NGD3 323 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 OR1J1Q8NGS3 322 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 OR5J2Q8NH18 312 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 OR6X1Q8NH79 312 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 SLITRK2Q9H156 845 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 LRMDAQ9H2I8 198 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 PURGQ9UJV8 347 aaKnown RBP11.82□□□□□ -0.52
VARS-227ENST00000489979 AUP1Q9Y679 476 aa11.82□□□□□ -0.52
VARS-227ENST00000489979 WNK1Q9H4A3 2382 aa11.81□□□□□ -0.52
VARS-227ENST00000489979 IQCMA0A1B0GVH7 501 aa11.81□□□□□ -0.52
VARS-227ENST00000489979 CLIC1O00299 241 aa11.81□□□□□ -0.52
VARS-227ENST00000489979 TPST2O60704 377 aa11.81□□□□□ -0.52
VARS-227ENST00000489979 MFN2O95140 757 aa11.81□□□□□ -0.52
VARS-227ENST00000489979 OR6A2O95222 327 aa11.81□□□□□ -0.52
VARS-227ENST00000489979 IDO1P14902 403 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms