RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 UGT2B15P54855 530 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 KRTAP24-1Q3LI83 254 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 CGB2Q6NT52 195 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 CARM1Q86X55 608 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 PFN4Q8NHR9 129 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SLC26A7Q8TE54 656 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 LRRC58Q96CX6 371 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SYT3Q9BQG1 590 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 REPIN1Q9BWE0 567 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 C20orf141Q9NUB4 165 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 REV1Q9UBZ9 1251 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 FZR1Q9UM11 496 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SH3GLB1Q9Y371 365 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SHOX2O60902 331 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 HPXP02790 462 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MT-ND1P03886 318 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 QDPRP09417 244 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 OR8G3PP0DMU2 310 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SRD5A1P18405 259 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 COL8A2P25067 703 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ALDH3B1P43353 468 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 CHN2P52757 468 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SRSF2Q01130 221 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RPL18Q07020 188 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 CYLC2Q14093 348 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MAD2L1BPQ15013 274 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 OR8J3Q8NGG0 315 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TMEM255BQ8WV15 326 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RASSF5Q8WWW0 418 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 HPS1Q92902 700 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MCHR2Q969V1 340 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ZNF347Q96SE7 839 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SPEF1Q9Y4P9 236 aa16.66■□□□□ 0.26
TNFRSF1B-202ENST00000489921 BLOC1S5-TXNDC5H3BN57 136 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 BCL10O95999 233 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 HIST1H2ABP04908 130 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 F13BP05160 661 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ERCC1P07992 297 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 CCL2P13500 99 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TCN1P20061 433 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 FUT4P22083 530 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ZNF133P52736 654 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 PIN1Q13526 163 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 COQ5Q5HYK3 327 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 HIST3H2AQ7L7L0 130 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 OR4K5Q8NGD3 323 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 LIPHQ8WWY8 451 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 HIST1H2ACQ93077 130 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SNX18Q96RF0 628 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MS4A5Q9H3V2 200 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RIMS3Q9UJD0 308 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 FBXL3Q9UKT7 428 aa16.65■□□□□ 0.26
TNFRSF1B-202ENST00000489921 M0R233 179 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NCR1O76036 304 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 OR7A10O76100 309 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 IGF2P01344 180 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 UMPSP11172 480 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 FUT1P19526 365 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 OR1E2P47887 323 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MYBPC1Q00872 1141 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 KLF10Q13118 480 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CR1LQ2VPA4 569 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 REP15Q6BDI9 236 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NANOGNBQ7Z5D8 188 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MOSPD2Q8NHP6 518 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 C10orf82Q8WW14 230 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ASB10Q8WXI3 467 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NMD3Q96D46 503 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ECSITQ9BQ95 431 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RACGAP1Q9H0H5 632 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SAR1AQ9NR31 198 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SLC7A8Q9UHI5 535 aa16.64■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TRMUO75648 421 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 OR5F1O95221 314 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CLPTM1O96005 669 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NPPAP01160 153 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 IGHG1P01857 330 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MMP7P09237 267 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 APEX1P27695 318 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 AQP2P41181 271 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RBM34P42696 430 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CDH15P55291 814 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 GALK2Q01415 458 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NRN1LQ496H8 165 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ARMC4Q5T2S8 1044 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 GKAP1Q5VSY0 366 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 DEF8Q6ZN54 512 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 LINC01356Q8N9X3 169 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SYT14Q8NB59 555 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SLC30A7Q8NEW0 376 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TMEM239Q8WW34 195 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 YIPF5Q969M3 257 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SH3GL1Q99961 368 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 POLR2J2Q9GZM3 115 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 POLR2J3Q9H1A7 115 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 DUSP13Q9UII6 198 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 BAG5Q9UL15 447 aa16.63■□□□□ 0.25
TNFRSF1B-202ENST00000489921 IGKV1D-43A0A0B4J1Z2 117 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MRASO14807 208 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 WNT9BO14905 357 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms