RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 OR2T1O43869 369 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 EIF1BO60739 113 aaKnown RBP9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 CD99P14209 185 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 GSTM3P21266 225 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 LOXP28300 417 aaPredicted RBP9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 SLC16A1P53985 500 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 OR2B6P58173 313 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 GABARAPL2P60520 117 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 CXCR4P61073 352 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 SLC35A1P78382 337 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 RPL18Q07020 188 aaKnown RBP9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 ACKR1Q16570 336 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 MS4A18Q3C1V0 323 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 ZIK1Q3SY52 487 aaPredicted RBP9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 ZBED5Q49AG3 693 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 SSX8Q7RTT4 187 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 OAFQ86UD1 273 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 WFDC8Q8IUA0 241 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 ZNF100Q8IYN0 542 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 ALDH16A1Q8IZ83 802 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 TMEM99Q8N816 258 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 SCAIQ8N9R8 606 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 ADPRHL1Q8NDY3 354 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 OR4Q3Q8NH05 313 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 OR5J2Q8NH18 312 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 OR51A7Q8NH64 312 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 HSD17B8Q92506 261 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 HDAC2Q92769 488 aaKnown RBP9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 SLC25A36Q96CQ1 311 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 GPX7Q96SL4 187 aaPredicted RBP9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 MYCBPQ99417 103 aaPredicted RBP9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 PITX2Q99697 317 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 TMUB1Q9BVT8 246 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 OR52D1Q9H346 318 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 UBTD1Q9HAC8 227 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 NGBQ9NPG2 151 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 NANSQ9NR45 359 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 SCN3BQ9NY72 215 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 IL20RAQ9UHF4 553 aa9.31□□□□□ -0.92
SCAMP4-208ENST00000489554 AQP7P3A6NL99 342 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 ZNF716A6NP11 495 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 ZAR1LA6NP61 321 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 BHLHE40O14503 412 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 AKR7A3O95154 331 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 SAGP10523 405 aaPredicted RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 HLA-DOBP13765 273 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 AQP2P41181 271 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 CRISP1P54107 249 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 ADAM8P78325 824 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 CDK5Q00535 292 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 ZP4Q12836 540 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 NPRL3Q12980 569 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 APOFQ13790 326 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 TMEM236Q5W0B7 351 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 ACSM5Q6NUN0 579 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 SMARCD3Q6STE5 483 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 PAQR6Q6TCH4 344 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 ZNF704Q6ZNC4 412 aaPredicted RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 BHLHA15Q7RTS1 189 aaPredicted RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 CDK20Q8IZL9 346 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 LRRC75A-AS1Q8N1F1 130 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 DEPDC4Q8N2C3 294 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 IQCF1Q8N6M8 205 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 FANK1Q8TC84 345 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 APH1AQ96BI3 265 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 PLPPR2Q96GM1 343 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 SAMD8Q96LT4 415 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 CCL19Q99731 98 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 NAA11Q9BSU3 229 aaPredicted RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 CXorf56Q9H5V9 222 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 SLC25A19Q9HC21 320 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 KRCC1Q9NPI7 259 aaPredicted RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 PRSS50Q9UI38 385 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 NDRG4Q9ULP0 352 aaKnown RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 NOSIPQ9Y314 301 aaKnown RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 TPRKBQ9Y3C4 175 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 CORINQ9Y5Q5 1042 aa9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 HRNRQ86YZ3 2850 aaPredicted RBP9.3□□□□□ -0.92
SCAMP4-208ENST00000489554 PRRC2AP48634 2157 aaKnown RBP9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 TRIM64A6NGJ6 449 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 ARHGEF9O43307 516 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 MPZL2O60487 215 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 SMPD2O60906 423 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 GNAO1P09471 354 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 CCDC159P0C7I6 412 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 COX5AP20674 150 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 HOXC12P31275 282 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 RIPPLY3P57055 190 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 EFNB1P98172 346 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 IL1RL1Q01638 556 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 TEKQ02763 1124 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 MFSD13AQ14CX5 517 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 PTGES3Q15185 160 aaKnown RBP9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 TSC22D1Q15714 1073 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 TAB1Q15750 504 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 ANKDD1AQ495B1 522 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 ZNF362Q5T0B9 420 aaPredicted RBP9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 SLX4IPQ5VYV7 408 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 SHEQ5VZ18 495 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms