RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TVP23AA6NH52 213 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 CENPBD1B2RD01 187 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 ZNF670-ZNF695F2Z2N8 137 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 K7EM74 188 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 DCTN6O00399 190 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 AQP7O14520 342 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 GPR171O14626 319 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 CYTIPO60759 359 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 ADRA2AP08913 450 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 OR2T7P0C7T2 308 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 LIMS3P0CW19 117 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 LIMS4P0CW20 117 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 PGA4P0DJD7 388 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 PGA3P0DJD8 388 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 FCGR2AP12318 317 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 CPN1P15169 458 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 WNT4P56705 351 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 ACTA2P62736 377 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 ACTG2P63267 376 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 FMODQ06828 376 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 RASGEF1BQ0VAM2 473 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 CAMK2DQ13557 499 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 SPHARQ15513 63 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 C3AR1Q16581 482 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 THEM4Q5T1C6 240 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 SYT6Q5T7P8 510 aaPredicted RBP8.92□□□□□ -0.98
USP11-211ENST00000489111 LINC01590Q5TEZ4 76 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 GPR107Q5VW38 600 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 FAM180AQ6UWF9 173 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 NHLRC1Q6VVB1 395 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 SLC16A9Q7RTY1 509 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.92□□□□□ -0.98
USP11-211ENST00000489111 LHFPL3Q86UP9 236 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 ZBTB46Q86UZ6 589 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 NANOGP1Q8N7R0 232 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 RBMXL3Q8N7X1 1067 aaKnown RBP8.92□□□□□ -0.98
USP11-211ENST00000489111 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 OR2T27Q8NH04 317 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 OR52N1Q8NH53 320 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 SARAFQ96BY9 339 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 OR2M2Q96R28 347 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 OR5M11Q96RB7 305 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 TIMP4Q99727 224 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 ALG8Q9BVK2 526 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 KLHL9Q9P2J3 617 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 LHX6Q9UPM6 363 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 B9D1Q9UPM9 204 aa8.92□□□□□ -0.98
USP11-211ENST00000489111 A0A1W2PPL8 197 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 A0A1W2PQL4 384 aaPredicted RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 ZNF716A6NP11 495 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 J3QRE1 110 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 SLC43A1O75387 559 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 TFP02787 698 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 MT-ND5P03915 603 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 CAPZA2P47755 286 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 HSF2Q03933 536 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 GALEQ14376 348 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 RNPS1Q15287 305 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 ARMCX4Q5H9R4 360 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 OR2G6Q5TZ20 316 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 RPUSD3Q6P087 351 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 ZNF322Q6U7Q0 402 aaPredicted RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 LYPD4Q6UWN0 246 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 AAED1Q7RTV5 226 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 P2RY8Q86VZ1 359 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 SIAH3Q8IW03 269 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 GLB1L2Q8IW92 636 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 OR10H5Q8NGA6 315 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 OR6N2Q8NGY6 317 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 FNDC9Q8TBE3 224 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 RNF128Q8TEB7 428 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 ABHD3Q8WU67 409 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 SNX33Q8WV41 574 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 SNRNP27Q8WVK2 155 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 ZNRF4Q8WWF5 429 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 NSMAFQ92636 917 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 DGCR14Q96DF8 476 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 WDYHV1Q96HA8 205 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 FOXN4Q96NZ1 517 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 ZNF385AQ96PM9 386 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 TAAR6Q96RI8 345 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 MNTQ99583 582 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 MGLLQ99685 303 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 MRPL13Q9BYD1 178 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 ULBP2Q9BZM5 246 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 YIPF3Q9GZM5 350 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 B3GAT2Q9NPZ5 323 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 LUZP4Q9P127 313 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 RSL24D1Q9UHA3 163 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 LAMP5Q9UJQ1 280 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 COA3Q9Y2R0 106 aaPredicted RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 LSM2Q9Y333 95 aaKnown RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 CAB39Q9Y376 341 aaPredicted RBP8.91□□□□□ -0.98
USP11-211ENST00000489111 ZNF175Q9Y473 711 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 FLVCR1Q9Y5Y0 555 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 TMEM14AQ9Y6G1 99 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 APC2O95996 2303 aa8.91□□□□□ -0.98
USP11-211ENST00000489111 IGKV3D-15A0A087WSY6 115 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 A0A1B0GVC2 190 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TMEM8BA6NDV4 472 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms