RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FNDC8Q8TC99 324 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 IGFBPL1Q8WX77 278 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 C7orf34Q96L11 122 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 RBP7Q96R05 134 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 BDH2Q9BUT1 245 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 KCNN2Q9H2S1 579 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 MUC13Q9H3R2 512 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 TRAV27A0A087WT01 109 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 A6NIZ1 184 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 OVOL3O00110 214 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 MGRN1O60291 552 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 GADD45GO95257 159 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 IGLV1-44P01699 117 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 HLA-HP01893 362 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 FABP3P05413 133 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 FOSL1P15407 271 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 ACVR1BP36896 505 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 CDKN1AP38936 164 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 GUCA1AP43080 201 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-218ENST00000489037 GPR4P46093 362 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 RAP1BP61224 184 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 RPL27P61353 136 aaKnown RBP12.43□□□□□ -0.42
BRCA1-218ENST00000489037 RAP1AP62834 184 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 VLDLRP98155 873 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 MYBPC1Q00872 1141 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 SPIBQ01892 262 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 NAAAQ02083 359 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 PIGFQ07326 219 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 CD47Q08722 323 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 ETFDHQ16134 617 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 ZBED5Q49AG3 693 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 MTX3Q5HYI7 312 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 LRFN4Q6PJG9 635 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 TMPRSS11FQ6ZWK6 438 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 DPPA2Q7Z7J5 298 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 MEX3DQ86XN8 651 aaKnown RBP12.43□□□□□ -0.42
BRCA1-218ENST00000489037 WDFY1Q8IWB7 410 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 SLC7A13Q8TCU3 470 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
BRCA1-218ENST00000489037 MCHR2Q969V1 340 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 Q96MF0 132 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 TNFRSF13CQ96RJ3 184 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 ZNF347Q96SE7 839 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 RNF121Q9H920 327 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 BARX1Q9HBU1 254 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-218ENST00000489037 ACTR3BQ9P1U1 418 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 SPEF1Q9Y4P9 236 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 PMF1-BGLAPU3KQ54 211 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 ACANP16112 2415 aa12.43□□□□□ -0.42
BRCA1-218ENST00000489037 DIRAS1O95057 198 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 IFNGR2P38484 337 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 PTDSS1P48651 473 aaKnown RBP12.42□□□□□ -0.42
BRCA1-218ENST00000489037 RAB1AP62820 205 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 LSM11P83369 360 aaKnown RBP eCLIP12.42□□□□□ -0.42
BRCA1-218ENST00000489037 HIST3H3Q16695 136 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 ARMC4Q5T2S8 1044 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 TMEM53Q6P2H8 277 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 CYP2R1Q6VVX0 501 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 B3GLCTQ6Y288 498 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 SLC22A24Q8N4F4 322 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 FAM86B1Q8N7N1 296 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 OR13C2Q8NGS9 318 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 OR52J3Q8NH60 311 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
BRCA1-218ENST00000489037 ALG12Q9BV10 488 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 MRPL13Q9BYD1 178 aaKnown RBP12.42□□□□□ -0.42
BRCA1-218ENST00000489037 TMEM38BQ9NVV0 291 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 GRHPRQ9UBQ7 328 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 ZNF346Q9UL40 294 aaKnown RBP12.42□□□□□ -0.42
BRCA1-218ENST00000489037 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 PRPF19Q9UMS4 504 aaKnown RBP12.42□□□□□ -0.42
BRCA1-218ENST00000489037 ARFGEF3Q5TH69 2177 aa12.42□□□□□ -0.42
BRCA1-218ENST00000489037 XKRYO14609 159 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 PTHP01270 115 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 CD8AP01732 235 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 IGHMP01871 453 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 NPR2P20594 1047 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 FLNAP21333 2647 aaKnown RBP12.41□□□□□ -0.42
BRCA1-218ENST00000489037 FUT4P22083 530 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 RUNX1T1Q06455 604 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 TRIM25Q14258 630 aaKnown RBP12.41□□□□□ -0.42
BRCA1-218ENST00000489037 RAB35Q15286 201 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 SLC36A2Q495M3 483 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 NRN1LQ496H8 165 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 THEM4Q5T1C6 240 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 RINLQ6ZS11 566 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 SLC16A14Q7RTX9 510 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 TSEN54Q7Z6J9 526 aaKnown RBP12.41□□□□□ -0.42
BRCA1-218ENST00000489037 IGFN1Q86VF2 1251 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 DHFR2Q86XF0 187 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 ZDHHC21Q8IVQ6 265 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 OR4K5Q8NGD3 323 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 C18orf12Q96KH6 178 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 DHRS1Q96LJ7 313 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 LRGUKQ96M69 825 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 CACNG6Q9BXT2 260 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 C1orf21Q9H246 121 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 SMURF2Q9HAU4 748 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 IL1RAPQ9NPH3 570 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms