RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NANOGNBQ7Z5D8 188 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 LINC01551Q86U37 167 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 CEP112Q8N8E3 955 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 Q8N976 141 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 OR1S2Q8NGQ3 325 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 ZFP90Q8TF47 636 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 TMEM54Q969K7 222 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 SH3GL1Q99961 368 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 ECSITQ9BQ95 431 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 TCHPQ9BT92 498 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 IFI27L2Q9H2X8 130 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 VCXQ9H320 206 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 TPK1Q9H3S4 243 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 CWH43Q9H720 699 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 RPF2Q9H7B2 306 aaKnown RBP2.01□□□□□ -2.09
CD46-215ENST00000488596 INPP5EQ9NRR6 644 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 RAB26Q9ULW5 256 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 CNTNAP1P78357 1384 aa2□□□□□ -2.09
CD46-215ENST00000488596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2□□□□□ -2.09
CD46-215ENST00000488596 LRP4O75096 1905 aa2□□□□□ -2.09
CD46-215ENST00000488596 IGLV4-69A0A075B6H9 119 aa2□□□□□ -2.09
CD46-215ENST00000488596 IGLV11-55A0A075B6I3 123 aa2□□□□□ -2.09
CD46-215ENST00000488596 HIDE1A8MVS5 230 aa2□□□□□ -2.09
CD46-215ENST00000488596 H0Y8G0 127 aa2□□□□□ -2.09
CD46-215ENST00000488596 CLIC3O95833 236 aa2□□□□□ -2.09
CD46-215ENST00000488596 BGLAPP02818 100 aa2□□□□□ -2.09
CD46-215ENST00000488596 RPS9P46781 194 aaKnown RBP2□□□□□ -2.09
CD46-215ENST00000488596 TFPI2P48307 235 aa2□□□□□ -2.09
CD46-215ENST00000488596 SULT1E1P49888 294 aa2□□□□□ -2.09
CD46-215ENST00000488596 GPX6P59796 221 aa2□□□□□ -2.09
CD46-215ENST00000488596 ACTA1P68133 377 aa2□□□□□ -2.09
CD46-215ENST00000488596 HMGCS1Q01581 520 aa2□□□□□ -2.09
CD46-215ENST00000488596 ECH1Q13011 328 aa2□□□□□ -2.09
CD46-215ENST00000488596 ZSCAN26Q16670 478 aa2□□□□□ -2.09
CD46-215ENST00000488596 ZNF691Q5VV52 312 aa2□□□□□ -2.09
CD46-215ENST00000488596 LYPD2Q6UXB3 125 aa2□□□□□ -2.09
CD46-215ENST00000488596 FAM228AQ86W67 206 aa2□□□□□ -2.09
CD46-215ENST00000488596 CDR2LQ86X02 465 aaPredicted RBP2□□□□□ -2.09
CD46-215ENST00000488596 MREGQ8N565 214 aa2□□□□□ -2.09
CD46-215ENST00000488596 N4BP2L2Q92802 583 aaPredicted RBP2□□□□□ -2.09
CD46-215ENST00000488596 KCTD14Q9BQ13 255 aaPredicted RBP2□□□□□ -2.09
CD46-215ENST00000488596 OSBPL10Q9BXB5 764 aa2□□□□□ -2.09
CD46-215ENST00000488596 SLC17A9Q9BYT1 436 aa2□□□□□ -2.09
CD46-215ENST00000488596 PATZ1Q9HBE1 687 aaKnown RBP2□□□□□ -2.09
CD46-215ENST00000488596 MYOZ2Q9NPC6 264 aa2□□□□□ -2.09
CD46-215ENST00000488596 SLC2A8Q9NY64 477 aa2□□□□□ -2.09
CD46-215ENST00000488596 TBX21Q9UL17 535 aa2□□□□□ -2.09
CD46-215ENST00000488596 PSG11Q9UQ72 335 aa2□□□□□ -2.09
CD46-215ENST00000488596 MRPS18BQ9Y676 258 aaKnown RBP2□□□□□ -2.09
CD46-215ENST00000488596 CENPJQ9HC77 1338 aaPredicted RBP1.99□□□□□ -2.09
CD46-215ENST00000488596 A0A0U1RQS6 177 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 XKRY2A2RUG3 117 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 F6UB75 175 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 UBXN8O00124 270 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 ANGPTL7O43827 346 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 SOX15O60248 233 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 PALMO75781 387 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 UTS2O95399 124 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 GNAO1P09471 354 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 TNNI1P19237 187 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 MAGP20916 626 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 AK4P27144 223 aaPredicted RBP1.99□□□□□ -2.09
CD46-215ENST00000488596 SERPINB5P36952 375 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 UGT2B15P54855 530 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 HERVK_113P61574 105 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 NUTF2P61970 127 aaKnown RBP1.99□□□□□ -2.09
CD46-215ENST00000488596 ACTA2P62736 377 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 ACTG2P63267 376 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 ACTC1P68032 377 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 SLC7A9P82251 487 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 MRPS22P82650 360 aaKnown RBP1.99□□□□□ -2.09
CD46-215ENST00000488596 PON3Q15166 354 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 SSX2Q16385 188 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 DEFB116Q30KQ4 102 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 TTLL9Q3SXZ7 439 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 TFDP3Q5H9I0 405 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 TMEM255AQ5JRV8 349 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 VAX1Q5SQQ9 334 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 DNAJC24Q6P3W2 148 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 STRADAQ7RTN6 431 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 TAS2R42Q7RTR8 314 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 PCP2Q8IVA1 136 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 STPG2Q8N412 459 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 MS4A15Q8N5U1 240 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 EID2Q8N6I1 236 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 B3GNT7Q8NFL0 401 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 KCNG3Q8TAE7 436 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 SLC2A14Q8TDB8 520 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 CD300LFQ8TDQ1 290 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 STARD4Q96DR4 205 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 TSSK3Q96PN8 268 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 ATP5SQ99766 215 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 PKIBQ9C010 78 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 NUP50Q9UKX7 468 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 STARD10Q9Y365 291 aa1.99□□□□□ -2.09
CD46-215ENST00000488596 HEATR9A2RTY3 570 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 FAM47DPA6NHR8 397 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 SPECC1L-ADORA2AF8WAN1 911 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms