RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF672Q499Z4 452 aaPredicted RBP13.15□□□□□ -0.3
CXCL12-207ENST00000488591 OR2T5Q6IEZ7 315 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 LRFN4Q6PJG9 635 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 SPATA24Q86W54 205 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF611Q8N823 705 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 FAM169BQ8N8A8 192 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 OR2T29Q8NH02 315 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 GNPDA2Q8TDQ7 276 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 MBD6Q96DN6 1003 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 SLC38A2Q96QD8 506 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 CCL19Q99731 98 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 ALG12Q9BV10 488 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 KATNB1Q9BVA0 655 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
CXCL12-207ENST00000488591 MMADHCQ9H3L0 296 aaPredicted RBP13.15□□□□□ -0.3
CXCL12-207ENST00000488591 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 REEP1Q9H902 201 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 POMPQ9Y244 141 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 SIGLEC7Q9Y286 467 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 LYVE1Q9Y5Y7 322 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 DHRS12A0PJE2 317 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 XKRYO14609 159 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 CCNB2O95067 398 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 OR8G3PP0DMU2 310 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 CD79AP11912 226 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 CBR1P16152 277 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-207ENST00000488591 ART1P52961 327 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 TUBA1BP68363 451 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 TUBA4AP68366 448 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 MYBPC1Q00872 1141 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 THEM4Q5T1C6 240 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 C1orf94Q6P1W5 598 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 SMARCD3Q6STE5 483 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 ZER1Q7Z7L7 766 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 KBTBD8Q8NFY9 601 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 LILRB1Q8NHL6 650 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-207ENST00000488591 HDAC2Q92769 488 aaKnown RBP13.14□□□□□ -0.31
CXCL12-207ENST00000488591 TSPAN32Q96QS1 320 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 KCNK17Q96T54 332 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 FOXC2Q99958 501 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 CHID1Q9BWS9 393 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-207ENST00000488591 YY1AP1Q9H869 796 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 BEX4Q9NWD9 120 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-207ENST00000488591 CISD1Q9NZ45 108 aaKnown RBP13.14□□□□□ -0.31
CXCL12-207ENST00000488591 AKAP6Q13023 2319 aa13.14□□□□□ -0.31
CXCL12-207ENST00000488591 SHISA9B4DS77 424 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 GNGT2O14610 69 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 ARHGEF9O43307 516 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 MGRN1O60291 552 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 UBL3O95164 117 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 CST1P01037 141 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 CRYAAP02489 173 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 CD53P19397 219 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 FPR3P25089 353 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 RPS6KA3P51812 740 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 CDH11P55287 796 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 GK3PQ14409 553 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 GSG1Q2KHT4 349 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 DEFB113Q30KQ7 82 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 NRN1LQ496H8 165 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 C10orf128Q5T292 105 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 DPY19L2P2Q6ZN68 376 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 ADGRG5Q8IZF4 528 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 SLC22A24Q8N4F4 322 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 ARIH2OSQ8N7S6 290 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 ZNF519Q8TB69 540 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 FANK1Q8TC84 345 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 TMEM171Q8WVE6 324 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 CANT1Q8WVQ1 401 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 ZNF570Q96NI8 536 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 TMEM38BQ9NVV0 291 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 CRNNQ9UBG3 495 aaPredicted RBP13.13□□□□□ -0.31
CXCL12-207ENST00000488591 SAMHD1Q9Y3Z3 626 aaKnown RBP13.13□□□□□ -0.31
CXCL12-207ENST00000488591 ATP23Q9Y6H3 246 aa13.13□□□□□ -0.31
CXCL12-207ENST00000488591 IGHV1-18A0A0C4DH31 117 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 AHCYL1O43865 530 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 SMPD2O60906 423 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 TMCC2O75069 709 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 RAB36O95755 333 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 IGKV3-15P01624 115 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 HLA-HP01893 362 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 ZNF26P17031 533 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-207ENST00000488591 NPR2P20594 1047 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 GSSP48637 474 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 ZNF133P52736 654 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-207ENST00000488591 PIGFQ07326 219 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 TSPAN31Q12999 210 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 RFX4Q33E94 735 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 PGBD2Q6P3X8 592 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 CCDC121Q6ZUS5 278 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 MDP1Q86V88 176 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 SKA3Q8IX90 412 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms