RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SIAH2O43255 324 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ARHGEF9O43307 516 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 GSTM3P21266 225 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 SDHAP31040 664 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 PEX19P40855 299 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 SH3BGRP55822 239 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-210ENST00000488228 RAP1BP61224 184 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 RAP1AP62834 184 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 DBPQ10586 325 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-210ENST00000488228 TAF11Q15544 211 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 RFX4Q33E94 735 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 TBRG1Q3YBR2 411 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ZFP1Q6P2D0 407 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 LRFN4Q6PJG9 635 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 KLHL24Q6TFL4 600 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 DPY19L2P2Q6ZN68 376 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 RASSF6Q6ZTQ3 369 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 PTCHD4Q6ZW05 846 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 RAI1Q7Z5J4 1906 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-210ENST00000488228 IQCF1Q8N6M8 205 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ARIH2OSQ8N7S6 290 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ATG16L2Q8NAA4 619 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ICA1LQ8NDH6 482 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 C1orf162Q8NEQ5 155 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-210ENST00000488228 OR4Q3Q8NH05 313 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 FAM222BQ8WU58 562 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 NMD3Q96D46 503 aaKnown RBP9.69□□□□□ -0.86
UBE4B-210ENST00000488228 LRR1Q96L50 414 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 DACH2Q96NX9 599 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ERMAPQ96PL5 475 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-210ENST00000488228 BDH2Q9BUT1 245 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ALG12Q9BV10 488 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 GABARAPL1Q9H0R8 117 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 S100A14Q9HCY8 104 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 NPAP1Q9NZP6 1156 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 STX18Q9P2W9 335 aaKnown RBP9.69□□□□□ -0.86
UBE4B-210ENST00000488228 KCNN3Q9UGI6 736 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 NDRG3Q9UGV2 375 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 OAZ3Q9UMX2 235 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF503-AS2A6NEH8 195 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF99A8MXY4 864 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-210ENST00000488228 BHLHE40O14503 412 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 XKRYO14609 159 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 QDPRP09417 244 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 EPXP11678 715 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 PRF1P14222 555 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 PPP3CBP16298 524 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 HOXC12P31275 282 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 RPS6KA3P51812 740 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 TGFBR3Q03167 851 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 PPA1Q15181 289 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 HIST3H3Q16695 136 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 GPR139Q6DWJ6 353 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 RPL13AP3Q6NVV1 102 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 FAHD1Q6P587 224 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF813Q6ZN06 617 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF295-AS1Q8N0V1 137 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 WDR31Q8NA23 367 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 SDR9C7Q8NEX9 313 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 TEX47Q8TBZ9 253 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 NSMAFQ92636 917 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 BCL2L2Q92843 193 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-210ENST00000488228 STMN2Q93045 179 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 MCHR2Q969V1 340 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 CENPNQ96H22 339 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-210ENST00000488228 TSSK6Q9BXA6 273 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 HDHD5Q9BXW7 423 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 OR10A4Q9H209 315 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 SYT4Q9H2B2 425 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 FN3KQ9H479 309 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 SMURF2Q9HAU4 748 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 SLC17A5Q9NRA2 495 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 IL20Q9NYY1 176 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 REV1Q9UBZ9 1251 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 POFUT2Q9Y2G5 429 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 UGT2A1Q9Y4X1 527 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 LRBAP50851 2863 aa9.68□□□□□ -0.86
UBE4B-210ENST00000488228 SLC22A23A1A5C7 686 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 PRSS37A4D1T9 235 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 A6NNC1 897 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 DEFB108AA8MXU0 73 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 CENPBD1B2RD01 187 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 G3V2T6 193 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 H3BN98 237 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 DHHO43323 396 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 MITFO75030 526 aaPredicted RBP9.67□□□□□ -0.86
UBE4B-210ENST00000488228 TXNDC12O95881 172 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 ANXA8P13928 327 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 HIST1H1CP16403 213 aaKnown RBP9.67□□□□□ -0.86
UBE4B-210ENST00000488228 CTLA4P16410 223 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 CRYGSP22914 178 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 POU1F1P28069 291 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 NOS3P29474 1203 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 DAPP51397 102 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 ARHGDIAP52565 204 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 PGGHGQ32M88 737 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 TIMM23BQ5SRD1 257 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 SLC35F1Q5T1Q4 408 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 C10orf128Q5T292 105 aa9.67□□□□□ -0.86
UBE4B-210ENST00000488228 OR7E24Q6IFN5 339 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms