RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ZNF99A8MXY4 864 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 B4DXG7 233 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 M0R233 179 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 XPNPEP2O43895 674 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 IGKV1D-16P01601 117 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 IGHV2-70P01814 119 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ALDOBP05062 364 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SERPINA5P05154 406 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 INHBAP08476 426 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 PRTN3P24158 256 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 GABRA3P34903 492 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 DIO1P49895 249 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ARHGDIAP52565 204 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 PCBD1P61457 104 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SIRPAP78324 504 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 GALK2Q01415 458 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 C2orf80Q0P641 193 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 DDX39BQ13838 428 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 HIST3H3Q16695 136 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 KRTAP27-1Q3LI81 207 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ELFN2Q5R3F8 820 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ATPAF1Q5TC12 328 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 LIPMQ5VYY2 423 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 OLFML2AQ68BL7 652 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 MZT2BQ6NZ67 158 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 C16orf89Q6UX73 402 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 Q6ZRM9 215 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 C3orf62Q6ZUJ4 267 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CREB3L2Q70SY1 520 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC46A3Q7Z3Q1 461 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CTAGE6Q86UF2 777 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 IGFN1Q86VF2 1251 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TUSC5Q8IXB3 177 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 DDIASQ8IXT1 998 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 C3orf56Q8N813 242 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ZBTB8BQ8NAP8 495 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 C8orf46Q8TAG6 207 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 LRRC8CQ8TDW0 803 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 DYRK2Q92630 601 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 NXNL1Q96CM4 212 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SDF2Q99470 211 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SMR3AQ99954 134 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TAPBPLQ9BX59 468 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TXLNGYQ9BZA5 131 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ROPN1BQ9BZX4 212 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ROPN1Q9HAT0 212 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CACYBPQ9HB71 228 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 GALNT9Q9HCQ5 603 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 MED11Q9P086 117 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 UPB1Q9UBR1 384 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 DNAJB11Q9UBS4 358 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 MIOXQ9UGB7 285 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 OPN4Q9UHM6 478 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 LRP12Q9Y561 859 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 INSIG2Q9Y5U4 225 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 PCNX1Q96RV3 2341 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 TRAV36DV7A0A075B6V5 113 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 NBPF19A0A087WUL8 3843 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 TMED7-TICAM2A0A0A6YYA0 188 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CLPSL1A2RUU4 121 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 G3V3Y1 287 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SULT2B1O00204 365 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 AP3D1O14617 1153 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SSX4O60224 188 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 DIAPH2O60879 1101 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CYP7B1O75881 506 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 VENTXO95231 258 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PLAUP00749 431 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 TK1P04183 234 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 EDN2P20800 178 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 THBS4P35443 961 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GDF5P43026 501 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 KCNJ1P48048 391 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PAX2Q02962 417 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 RBBP4Q09028 425 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 EXOSC7Q15024 291 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GPR68Q15743 365 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 DUSP5Q16690 384 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 TRMT5Q32P41 509 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CFAP157Q5JU67 520 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF613Q6PF04 617 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SYT10Q6XYQ8 523 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 AAED1Q7RTV5 226 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PXKQ7Z7A4 578 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 MARCH3Q86UD3 253 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC15A3Q8IY34 581 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GCNT2Q8N0V5 402 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ZIC4Q8N9L1 334 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CLDND2Q8NHS1 167 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CKAP2Q8WWK9 683 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ST8SIA2Q92186 375 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GTF3AQ92664 365 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ATP6V1E2Q96A05 226 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 R3HDM4Q96D70 268 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 FAM120BQ96EK7 910 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 DNAJA3Q96EY1 480 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 APOPT1Q96IL0 206 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC35G5Q96KT7 338 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF583Q96ND8 569 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CTDSP1Q9GZU7 261 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms