RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 HSD17B2P37059 387 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 CRYBB2P43320 205 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 RPS9P46781 194 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 GPX6P59796 221 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 SLC7A9P82251 487 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 SMARCB1Q12824 385 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 GGTLC2Q14390 218 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 PON3Q15166 354 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 ZNF691Q5VV52 312 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 RNASEKQ6P5S7 137 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 SASS6Q6UVJ0 657 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 IGFL3Q6UXB1 125 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 Q6ZR03 302 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 FAM228AQ86W67 206 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 CDH26Q8IXH8 852 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 Q8N976 141 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 ZNF596Q8TC21 504 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 ZFP90Q8TF47 636 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 GEMIN6Q8WXD5 167 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 IFT74Q96LB3 600 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 SH3GL1Q99961 368 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 TCHPQ9BT92 498 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 PATZ1Q9HBE1 687 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 ETNK2Q9NVF9 386 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 LSM7Q9UK45 103 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 IKZF2Q9UKS7 526 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 TBX21Q9UL17 535 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 KIAA1257Q9ULG3 409 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 PSG11Q9UQ72 335 aa1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 MRPS18BQ9Y676 258 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-219ENST00000488035 WDR62O43379 1518 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 IGLV4-69A0A075B6H9 119 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 A0A0U1RQS6 177 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 XKRY2A2RUG3 117 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 H3BNH8 94 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 KMOO15229 486 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ICOSLGO75144 302 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 EIF3GO75821 320 aaKnown RBP eCLIP1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ERLIN2O94905 339 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 SNX4O95219 450 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 C6orf47O95873 294 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 PLEKP08567 350 aaPredicted RBP1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ADRB3P13945 408 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 HRH1P35367 487 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 TFPI2P48307 235 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ACTA2P62736 377 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ACTG2P63267 376 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ACTC1P68032 377 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ACTA1P68133 377 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 HMGCS1Q01581 520 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 TGFBIQ15582 683 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 TTLL9Q3SXZ7 439 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 DNAJC24Q6P3W2 148 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 ZYG11AQ6WRX3 759 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 RUFY3Q7L099 469 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 MMAAQ8IVH4 418 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 B3GNT7Q8NFL0 401 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 KCNG3Q8TAE7 436 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 CD300LFQ8TDQ1 290 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 RNF139Q8WU17 664 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 DUS3LQ96G46 650 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 OSBPL10Q9BXB5 764 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 SLC17A9Q9BYT1 436 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 GPR61Q9BZJ8 451 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 RPF2Q9H7B2 306 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 SLC40A1Q9NP59 571 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 FGF20Q9NP95 211 aaPredicted RBP1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 RAB26Q9ULW5 256 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 STARD10Q9Y365 291 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 KANK1Q14678 1352 aa1.72□□□□□ -2.13
R3HDM1-219ENST00000488035 IGLV11-55A0A075B6I3 123 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 OR2AG2A6NM03 316 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 ZNF716A6NP11 495 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 RSPH10B2B2RC85 870 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 DLGAP1O14490 977 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 ANGPTL7O43827 346 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 DFNA5O60443 496 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 PALMO75781 387 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 IGKV3-11P04433 115 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 CRYGBP07316 175 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 RETP07949 1114 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 GNAO1P09471 354 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 RSPH10BP0C881 870 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 ZNF735P0CB33 412 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 MCF2P10911 925 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 CHMLP26374 656 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 SERPINB5P36952 375 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 NSG1P42857 185 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 MNAT1P51948 309 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 SUCLG1P53597 346 aaKnown RBP1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 LINC00315P59091 139 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 NUTF2P61970 127 aaKnown RBP1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 MRPS22P82650 360 aaKnown RBP1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 SLAQ13239 276 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 MRPL23Q16540 153 aaKnown RBP1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 ZSCAN26Q16670 478 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 KCTD19Q17RG1 926 aaPredicted RBP1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 DEFB116Q30KQ4 102 aa1.71□□□□□ -2.14
R3HDM1-219ENST00000488035 COA6Q5JTJ3 125 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms