RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 C2CD4DB7Z1M9 353 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 GLSO94925 669 aaPredicted RBP16.24■□□□□ 0.19
VIM-206ENST00000487938 ALDOBP05062 364 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 KIR3DL2P43630 455 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 EFNB2P52799 333 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 PUDPQ08623 228 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 TCTE1Q5JU00 501 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 OLFML2AQ68BL7 652 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 PRSS58Q8IYP2 241 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 MEIOBQ8N635 442 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 OR51D1Q8NGF3 324 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 ADIPOR1Q96A54 375 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 PELOQ9BRX2 385 aaKnown RBP16.24■□□□□ 0.19
VIM-206ENST00000487938 LAT2Q9GZY6 243 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 DIABLOQ9NR28 239 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 EMC3Q9P0I2 261 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 GTF2A1LQ9UNN4 478 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 ETV7Q9Y603 341 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 TMEM150CB9EJG8 249 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 ICMTO60725 284 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 ZNF254O75437 659 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 GALNSP34059 522 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 NR0B1P51843 470 aaKnown RBP16.24■□□□□ 0.19
VIM-206ENST00000487938 ELOCQ15369 112 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 WDR38Q5JTN6 314 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 YOD1Q5VVQ6 348 aaPredicted RBP16.24■□□□□ 0.19
VIM-206ENST00000487938 GPR139Q6DWJ6 353 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 CCDC28AQ8IWP9 274 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 OR52B4Q8NGK2 314 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 GPR148Q8TDV2 347 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 RBP7Q96R05 134 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 NUDT9Q9BW91 350 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 ELOVL3Q9HB03 270 aa16.24■□□□□ 0.19
VIM-206ENST00000487938 SEC16AO15027 2179 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 PCNX3Q9H6A9 2034 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 TRBV5-7A0A0A0MS05 114 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 MEIS3P1A6NDR6 274 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 FRG2CA6NGY1 282 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 IGLV3-19P01714 112 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 BGLAPP02818 100 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 EFNA3P52797 238 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 PSMA6P60900 246 aaKnown RBP16.23■□□□□ 0.19
VIM-206ENST00000487938 EGR3Q06889 387 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 DEFB133Q30KQ1 61 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 TOR2AQ5JU69 321 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 ZNF227Q86WZ6 799 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 SDR16C5Q8N3Y7 309 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 ZNF417Q8TAU3 575 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 ZNF721Q8TF20 911 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 TSEN15Q8WW01 171 aaKnown RBP16.23■□□□□ 0.19
VIM-206ENST00000487938 CUTCQ9NTM9 273 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 GLTPQ9NZD2 209 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 PIPOXQ9P0Z9 390 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 STEAP1Q9UHE8 339 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 SLC22A13Q9Y226 551 aa16.23■□□□□ 0.19
VIM-206ENST00000487938 CIB4A0PJX0 185 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 TMEM212A6NML5 194 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 DDAH2O95865 285 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 HRGP04196 525 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 IL12BP29460 328 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 MRPS10P82664 201 aaKnown RBP16.22■□□□□ 0.19
VIM-206ENST00000487938 GRK1Q15835 563 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 MEP1BQ16820 701 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 PCGF3Q3KNV8 242 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 OTOSQ8NHW6 89 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 DCBLD2Q96PD2 775 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 PYCARD-AS1I3L0S3 204 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 XKRYO14609 159 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 XRCC3O43542 346 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 SDC3O75056 442 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 RBBP9O75884 186 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 IFNA7P01567 189 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 CSRP1P21291 193 aaKnown RBP16.22■□□□□ 0.19
VIM-206ENST00000487938 GUCA2AQ02747 115 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 ETFDHQ16134 617 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 VWA2Q5GFL6 755 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 BIVMQ86UB2 503 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 OR4D10Q8NGI6 311 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 MED30Q96HR3 178 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 C4orf45Q96LM5 186 aa16.22■□□□□ 0.19
VIM-206ENST00000487938 TLCD2A6NGC4 264 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 TMEM127O75204 238 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 NDUFB6O95139 128 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 IGKV3-11P04433 115 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 IFNGR1P15260 489 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 CCKBRP32239 447 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 ARPC4P59998 168 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 NHLRC1Q6VVB1 395 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 CDH24Q86UP0 819 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 GKN2Q86XP6 184 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 METTL21AQ8WXB1 218 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.21■□□□□ 0.19
VIM-206ENST00000487938 UBQLN2Q9UHD9 624 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 MRTO4Q9UKD2 239 aaKnown RBP16.21■□□□□ 0.19
VIM-206ENST00000487938 FBXL3Q9UKT7 428 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 B9D1Q9UPM9 204 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 TMEM14AQ9Y6G1 99 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 RPS10-NUDT3A0A1W2PQS6 291 aa16.21■□□□□ 0.19
VIM-206ENST00000487938 FITM1A5D6W6 292 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms