RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 KRR1Q13601 381 aaKnown RBP11.72□□□□□ -0.53
COL4A6-207ENST00000487645 CLEC12AQ5QGZ9 265 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 PHYHD1Q5SRE7 291 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 SLC27A4Q6P1M0 643 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 P2RY8Q86VZ1 359 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 SYT14Q8NB59 555 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-207ENST00000487645 NOXO1Q8NFA2 376 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 KISS1RQ969F8 398 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-207ENST00000487645 MCHR2Q969V1 340 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 EME1Q96AY2 570 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 NMD3Q96D46 503 aaKnown RBP11.72□□□□□ -0.53
COL4A6-207ENST00000487645 MUS81Q96NY9 551 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 ULBP2Q9BZM5 246 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 CRLF2Q9HC73 371 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-207ENST00000487645 C8orf4Q9NR00 106 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 HEATR1Q9H583 2144 aaKnown RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 CIB4A0PJX0 185 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 SLC22A23A1A5C7 686 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF99A8MXY4 864 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 PRSS44E7EML9 344 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 SOCS2O14508 198 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 EI24O14681 340 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 DHHO43323 396 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 MGRN1O60291 552 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 HMGN1P05114 100 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 HIST1H1CP16403 213 aaKnown RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 IGFBP2P18065 325 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 CDH2P19022 906 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 POU1F1P28069 291 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 GRNP28799 593 aaKnown RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 GRK5P34947 590 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 CDKN2AP42771 156 aaKnown RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 MYBPC1Q00872 1141 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 RIPK1Q13546 671 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 GINS1Q14691 196 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 GABRA6Q16445 453 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 CEACAM16Q2WEN9 425 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 MESTQ5EB52 335 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF362Q5T0B9 420 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 SLC25A47Q6Q0C1 308 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF627Q7L945 461 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 BHLHA15Q7RTS1 189 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 CBR4Q8N4T8 237 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 ACBD4Q8NC06 268 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 OR4Q3Q8NH05 313 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 RASD2Q96D21 266 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 ALKBH3Q96Q83 286 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 TEX12Q9BXU0 123 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 RNPEPL1Q9HAU8 725 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 SLC25A19Q9HC21 320 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 VSX1Q9NZR4 365 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 NDRG3Q9UGV2 375 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 KLHL21Q9UJP4 597 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 ORC6Q9Y5N6 252 aa11.71□□□□□ -0.53
COL4A6-207ENST00000487645 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.53
COL4A6-207ENST00000487645 CASQ2O14958 399 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-207ENST00000487645 MITFO75030 526 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-207ENST00000487645 LYZL6O75951 148 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 RENP00797 406 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 IL32P24001 234 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 ZNF84P51523 738 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 RAD23AP54725 363 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 SLC34A1Q06495 639 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 CD47Q08722 323 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 NPRL3Q12980 569 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 PTGES3Q15185 160 aaKnown RBP11.7□□□□□ -0.54
COL4A6-207ENST00000487645 PGGHGQ32M88 737 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 SLC35F1Q5T1Q4 408 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 C10orf128Q5T292 105 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 ACSM5Q6NUN0 579 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 ANKRD16Q6P6B7 361 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 PTCHD4Q6ZW05 846 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 SSX8Q7RTT4 187 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 JAZF1Q86VZ6 243 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 DMRTC2Q8IXT2 367 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-207ENST00000487645 HSD17B8Q92506 261 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 BCL2L2Q92843 193 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-207ENST00000487645 ZNF837Q96EG3 531 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-207ENST00000487645 SLC29A1Q99808 456 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 SPOCK3Q9BQ16 436 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 GABARAPL3Q9BY60 117 aa11.7□□□□□ -0.54
COL4A6-207ENST00000487645 PRR14LQ5THK1 2151 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 CRYBG3Q68DQ2 2970 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 ZAR1LA6NP61 321 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 C19orf84I3L1E1 186 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 IFNGP01579 166 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 PAX7P23759 505 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 CRABP1P29762 137 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 ARF1P84077 181 aaKnown RBP11.69□□□□□ -0.54
COL4A6-207ENST00000487645 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL4A6-207ENST00000487645 TRIP10Q15642 601 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 NRN1LQ496H8 165 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 TIMM23BQ5SRD1 257 aa11.69□□□□□ -0.54
COL4A6-207ENST00000487645 SP5Q6BEB4 398 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms