RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SGCEO43556 437 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 NME2P22392 152 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 DCDP81605 110 aaKnown RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 HEPHL1Q6MZM0 1159 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 SYT9Q86SS6 491 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 BPHLQ86WA6 291 aaPredicted RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 TMEM30AQ9NV96 361 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 DHCR7Q9UBM7 475 aaKnown RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 A0A1W2PR48 441 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 HSBP1L1C9JCN9 74 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 TNFRSF10CO14798 259 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 EIF4E2O60573 245 aaKnown RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 CD53P19397 219 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 DPP4P27487 766 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 DPTQ07507 201 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 IAH1Q2TAA2 248 aaPredicted RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 TRMT12Q53H54 448 aaKnown RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF385BQ569K4 471 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 PRAMEF20Q5VT98 475 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 C1orf140Q5VVS0 124 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF845Q96IR2 970 aaPredicted RBP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 TMEM43Q9BTV4 400 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 GPATCH2Q9NW75 528 aa13.52□□□□□ -0.24
EPHB4-206ENST00000487222 PUS1Q9Y606 427 aaKnown RBP eCLIP13.52□□□□□ -0.24
EPHB4-206ENST00000487222 RAB19A4D1S5 217 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 ARGFXA6NJG6 315 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 RAF1P04049 648 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 M6PRP20645 277 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 SLC19A1P41440 591 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 ECI1P42126 302 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 SRP9P49458 86 aaKnown RBP13.52□□□□□ -0.25
EPHB4-206ENST00000487222 PGFP49763 221 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 KIAA1024LP59773 190 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 CAMK2BQ13554 666 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 LIPNQ5VXI9 398 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 KCNIP4Q6PIL6 250 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 PRSS45Q7RTY3 260 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 ADGRF3Q8IZF5 1079 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 FAM213BQ8TBF2 198 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 LRFN5Q96NI6 719 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 FYTTD1Q96QD9 318 aaKnown RBP13.52□□□□□ -0.25
EPHB4-206ENST00000487222 LPLP06858 475 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 OMGP23515 440 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 MRPL19P49406 292 aaKnown RBP13.52□□□□□ -0.25
EPHB4-206ENST00000487222 TLE4Q04727 773 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 IKZF1Q13422 519 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 HSF5Q4G112 596 aaPredicted RBP13.52□□□□□ -0.25
EPHB4-206ENST00000487222 SFRP5Q5T4F7 317 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 RSPO2Q6UXX9 243 aaPredicted RBP13.52□□□□□ -0.25
EPHB4-206ENST00000487222 ZNF610Q8N9Z0 462 aa13.52□□□□□ -0.25
EPHB4-206ENST00000487222 ZMAT3Q9HA38 289 aaKnown RBP13.52□□□□□ -0.25
EPHB4-206ENST00000487222 NXT1Q9UKK6 140 aaKnown RBP13.52□□□□□ -0.25
EPHB4-206ENST00000487222 TGM4P49221 684 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 FCRL6Q6DN72 434 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 SECTM1Q8WVN6 248 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 SLC35A4Q96G79 324 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 SGPP1Q9BX95 441 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 HAO2Q9NYQ3 351 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 MED16Q9Y2X0 877 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 K7ESM1 405 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 TMPRSS11DO60235 418 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 NSA2O95478 260 aaKnown RBP13.51□□□□□ -0.25
EPHB4-206ENST00000487222 SSR4P51571 173 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 HBG1P69891 147 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 HBG2P69892 147 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 MRPL58Q14197 206 aaKnown RBP13.51□□□□□ -0.25
EPHB4-206ENST00000487222 ZNF74Q16587 644 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 ANKRD34AQ69YU3 496 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 FAHD1Q6P587 224 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 FAM122BQ7Z309 247 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 GRINAQ7Z429 371 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 TMEM99Q8N816 258 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 SLC30A7Q8NEW0 376 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 TERB2Q8NHR7 220 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 ST7LQ8TDW4 575 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 NKX3-1Q99801 234 aaPredicted RBP13.51□□□□□ -0.25
EPHB4-206ENST00000487222 ULBP3Q9BZM4 244 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 OR52A5Q9H2C5 316 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 BCL2L10Q9HD36 194 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 MYOTQ9UBF9 498 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 SIGLEC6O43699 453 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 GIPP09681 153 aaPredicted RBP13.51□□□□□ -0.25
EPHB4-206ENST00000487222 SOHLH1Q5JUK2 328 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 HIST2H3PS2Q5TEC6 136 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 TCTN3Q6NUS6 607 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 RBMS3Q6XE24 437 aaKnown RBP13.51□□□□□ -0.25
EPHB4-206ENST00000487222 CYHR1Q6ZMK1 362 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 DCXRQ7Z4W1 244 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 OR51S1Q8NGJ8 323 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 ZNF775Q96BV0 537 aaPredicted RBP13.51□□□□□ -0.25
EPHB4-206ENST00000487222 RAB39BQ96DA2 213 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 FGF22Q9HCT0 170 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 TRAPPC2LQ9UL33 140 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 HS3ST3A1Q9Y663 406 aa13.51□□□□□ -0.25
EPHB4-206ENST00000487222 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms