RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 METTL25Q8N6Q8 603 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF441Q8N8Z8 693 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 CCDC197Q8NCU1 140 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 PAPD5Q8NDF8 572 aaKnown RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 TMEM104Q8NE00 496 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 OR5D18Q8NGL1 313 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 OR4C15Q8NGM1 316 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZPLD1Q8TCW7 415 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF721Q8TF20 911 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 UCN3Q969E3 161 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ABTB1Q969K4 478 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 WDYHV1Q96HA8 205 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 SENP5Q96HI0 755 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 HINT2Q9BX68 163 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 AICDAQ9GZX7 198 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 MMP27Q9H306 513 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 NT5DC2Q9H857 520 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 UBTD1Q9HAC8 227 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZBTB26Q9HCK0 441 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 LYRM4Q9HD34 91 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZFP57Q9NU63 452 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF701Q9NV72 531 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 MTCH1Q9NZJ7 389 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 ONECUT1Q9UBC0 465 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 RHCGQ9UBD6 479 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 EXOGQ9Y2C4 368 aaKnown RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 UBE2J1Q9Y385 318 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 TESMINQ9Y4I5 508 aa6.06□□□□□ -1.44
HDAC3-209ENST00000486618 CHCHD2Q9Y6H1 151 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-209ENST00000486618 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.05□□□□□ -1.441e-6■■■■■ 31
HDAC3-209ENST00000486618 TCRBV7S3A2A0A539 114 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 NPIPB8E9PQR5 432 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 SCDO00767 359 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 LDB3O75112 727 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 NME6O75414 186 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 RCBTB2O95199 551 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ETHE1O95571 254 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ABHD16AO95870 558 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ACTL6AO96019 429 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 FGGP02679 453 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 SLC35E2BP0CK96 405 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 SLC35E2P0CK97 266 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 DTYMKP23919 212 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CERS1P27544 350 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ETV4P43268 484 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 MAGEA6P43360 314 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 MAGEB1P43366 347 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 PTDSS1P48651 473 aaKnown RBP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 PTH2RP49190 550 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TGM4P49221 684 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CAMPP49913 170 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF75DP51815 510 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CXCR4P61073 352 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 MAGOHP61326 146 aaKnown RBP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TXNL4AP83876 142 aaKnown RBP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TIAL1Q01085 375 aaKnown RBP eCLIP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 MGAT2Q10469 447 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 SLC29A2Q14542 456 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 RAB39AQ14964 217 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TGFBIQ15582 683 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 GSTA3Q16772 222 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TMEM44Q2T9K0 475 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 NDUFAF6Q330K2 333 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ADPRMQ3LIE5 342 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CHRFAM7AQ494W8 412 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ENPP6Q6UWR7 440 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CFAP77Q6ZQR2 320 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 C9orf40Q8IXQ3 194 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 LINC01356Q8N9X3 169 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 C9orf106Q8NAJ2 232 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 DNAAF1Q8NEP3 725 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 NUDT10Q8NFP7 164 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 OR10H4Q8NGA5 316 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 OR4C5Q8NGB2 326 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 OR10G3Q8NGC4 313 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TMEM171Q8WVE6 324 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CACNG8Q8WXS5 425 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CAVIN3Q969G5 261 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ESAMQ96AP7 390 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 OMA1Q96E52 524 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 PIK3IP1Q96FE7 263 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 LCORQ96JN0 433 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF583Q96ND8 569 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 SERPINB12Q96P63 405 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 CSF3RQ99062 836 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TMEM246Q9BRR3 403 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TMEM43Q9BTV4 400 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 UGT2B28Q9BY64 529 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 EGLN1Q9GZT9 426 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 SRD5A3Q9H8P0 318 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 BARX1Q9HBU1 254 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 PROK2Q9HC23 129 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 LIN7CQ9NUP9 197 aaKnown RBP6.05□□□□□ -1.44
HDAC3-209ENST00000486618 GID8Q9NWU2 228 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 PACSIN3Q9UKS6 424 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 MKLN1Q9UL63 735 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 SLC6A5Q9Y345 797 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 GRIP1Q9Y3R0 1128 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 TNFRSF18Q9Y5U5 241 aa6.05□□□□□ -1.44
HDAC3-209ENST00000486618 DPPA5A6NC42 116 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms