RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 AK1P00568 194 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 LCKP06239 509 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 NHLRC4P0CG21 123 aaPredicted RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 PNMTP11086 282 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 MMP9P14780 707 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 SDC1P18827 310 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 DRD4P21917 467 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 UQCRC2P22695 453 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 MSX2P35548 267 aaPredicted RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 TGFBR2P37173 567 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 MDH2P40926 338 aaKnown RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 PKNOX1P55347 436 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 UCP2P55851 309 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 PCBP3P57721 371 aaKnown RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 KCNJ10P78508 379 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 DR1Q01658 176 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 FUT5Q11128 374 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 BNIP2Q12982 314 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 PMS2P3Q13401 168 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 CAMK2DQ13557 499 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 MOGQ16653 247 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 IMPG1Q17R60 797 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 TYW3Q6IPR3 259 aaKnown RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 HMGN2P46Q86SG4 172 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 C20orf196Q8IYI0 205 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 MUC20Q8N307 709 aaPredicted RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 PIK3C3Q8NEB9 887 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 SLC30A7Q8NEW0 376 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 CLHC1Q8NHS4 586 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 SFXN5Q8TD22 340 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 HRASLS5Q96KN8 279 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 TSSK3Q96PN8 268 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 OSBPL9Q96SU4 736 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 PRPF18Q99633 342 aaKnown RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 CCT7Q99832 543 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 NUDT16L1Q9BRJ7 211 aaKnown RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 TAPBPLQ9BX59 468 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 EGLN1Q9GZT9 426 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 MRPL46Q9H2W6 279 aaKnown RBP6.82□□□□□ -1.32
XRN1-212ENST00000486211 USH1CQ9Y6N9 552 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
XRN1-212ENST00000486211 C22orf46C9J442 243 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 RNASEK-C17orf49H0YIS7 233 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 FZD7O75084 574 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 GUSBP08236 651 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 ZNF43P17038 809 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 CPT2P23786 658 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 PRPH2P23942 346 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 GABRA5P31644 462 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 STX2P32856 288 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 CFHR2P36980 270 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 MPV17P39210 176 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 GNB2P62879 340 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 EGFEM1PQ0D2K5 195 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 CHI3L2Q15782 390 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 NSUN5P1Q3KNT7 163 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 FAM153CQ494X1 144 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 DMRTC1Q5HYR2 192 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 C1orf140Q5VVS0 124 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 FRRS1Q6ZNA5 592 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 KLBQ86Z14 1044 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 SKA3Q8IX90 412 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 KLHDC1Q8N7A1 406 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 OR5AK3PQ8NH89 298 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 C10orf82Q8WW14 230 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 IPCEF1Q8WWN9 437 aaPredicted RBP6.81□□□□□ -1.32
XRN1-212ENST00000486211 GATAD2BQ8WXI9 593 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 LRTOMTQ8WZ04 291 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 R3HDM4Q96D70 268 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 METTL2AQ96IZ6 378 aaKnown RBP6.81□□□□□ -1.32
XRN1-212ENST00000486211 OXGR1Q96P68 337 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 ARHGDIGQ99819 225 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 PCGF1Q9BSM1 259 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 PTDSS2Q9BVG9 487 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 CDADC1Q9BWV3 514 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 BCL2L14Q9BZR8 327 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 DPAGT1Q9H3H5 408 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 NANOGQ9H9S0 305 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
XRN1-212ENST00000486211 BAIAP2L1Q9UHR4 511 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 RPUSD1Q9UJJ7 312 aaKnown RBP6.81□□□□□ -1.32
XRN1-212ENST00000486211 VPREB3Q9UKI3 123 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 SNX24Q9Y343 169 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 JRKLQ9Y4A0 524 aa6.81□□□□□ -1.32
XRN1-212ENST00000486211 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 NUP214P35658 2090 aaPredicted RBP6.8□□□□□ -1.32
XRN1-212ENST00000486211 IGHV1-69DA0A0B4J2H0 117 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 A8MVM7 634 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 P2RY10O00398 339 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 SEC22BO75396 215 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 FBXO24O75426 580 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 IGHV1-69P01742 117 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 TFPTP0C1Z6 253 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 LAMP1P11279 417 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 RPS2P15880 293 aaKnown RBP6.8□□□□□ -1.32
XRN1-212ENST00000486211 CXCR1P25024 350 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 EPS8Q12929 822 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 SPDYE7PQ495Y7 208 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 TTMPQ5BVD1 217 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 CARD17Q5XLA6 110 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms