RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
SSR4-211ENST00000486204 TXNIPQ9H3M7 391 aa11.3□□□□□ -0.6
SSR4-211ENST00000486204 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
SSR4-211ENST00000486204 ZNF226Q9NYT6 803 aa11.3□□□□□ -0.6
SSR4-211ENST00000486204 NPAP1Q9NZP6 1156 aa11.3□□□□□ -0.6
SSR4-211ENST00000486204 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
SSR4-211ENST00000486204 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
SSR4-211ENST00000486204 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 A0A1W2PRG6 482 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 ZNF726A6NNF4 738 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 M0R3G1 203 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 TNFRSF11BO00300 401 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 WIPF1O43516 503 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 OR10H3O60404 316 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 FKBP6O75344 327 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 KRT33AO76009 404 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 BCL10O95999 233 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 IFNA2P01563 188 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 FPR3P25089 353 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 DAP3P51398 398 aaKnown RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 SH3BGRP55822 239 aaPredicted RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 CCNIQ14094 377 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 STK11Q15831 433 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 CEACAM16Q2WEN9 425 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 TBRG1Q3YBR2 411 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 OR7E24Q6IFN5 339 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 FAM122BQ7Z309 247 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 YTHDF3Q7Z739 585 aaKnown RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 P2RY8Q86VZ1 359 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 NOXO1Q8NFA2 376 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 ZNF519Q8TB69 540 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 HSD17B8Q92506 261 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 HDAC2Q92769 488 aaKnown RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 BCL2L2Q92843 193 aaPredicted RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 ZNF566Q969W8 418 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 NMD3Q96D46 503 aaKnown RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 TSPAN32Q96QS1 320 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
SSR4-211ENST00000486204 SLC17A5Q9NRA2 495 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 TMCC3Q9ULS5 477 aa11.29□□□□□ -0.6
SSR4-211ENST00000486204 A0A1W2PR80 420 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 UNC119BA6NIH7 251 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 CENPBD1B2RD01 187 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 CASKO14936 926 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 TRMUO75648 421 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 CST1P01037 141 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 ACADSP16219 412 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 HOXB6P17509 224 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 CDH2P19022 906 aaPredicted RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 CSNK1A1P48729 337 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 ZNF133P52736 654 aaPredicted RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 CTXN1P60606 82 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 PRPS1P60891 318 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 RPL27P61353 136 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 PPA1Q15181 289 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 TAF11Q15544 211 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 HIKESHIQ53FT3 197 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 LRFN4Q6PJG9 635 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 ZNF627Q7L945 461 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 TMEM179BQ7Z7N9 219 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 OR6N1Q8NGY5 312 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 OR52N5Q8NH56 324 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 PIK3IP1Q96FE7 263 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 DUS3LQ96G46 650 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 KATNB1Q9BVA0 655 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 ULBP2Q9BZM5 246 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 REEP1Q9H902 201 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 KRCC1Q9NPI7 259 aaPredicted RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 NRIP3Q9NQ35 241 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 GLTPQ9NZD2 209 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 ZNF346Q9UL40 294 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 ADAM18Q9Y3Q7 739 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 SAMHD1Q9Y3Z3 626 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 U3KQV3 271 aa11.28□□□□□ -0.6
SSR4-211ENST00000486204 CHD3Q12873 2000 aaKnown RBP11.28□□□□□ -0.6
SSR4-211ENST00000486204 ARPC4-TTLL3A0A0A6YYG9 625 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 ZNF503-AS2A6NEH8 195 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 ZNF99A8MXY4 864 aaPredicted RBP11.27□□□□□ -0.61
SSR4-211ENST00000486204 HAX1O00165 279 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 SEC14L2O76054 403 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 CCNB2O95067 398 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 NDUFB2O95178 105 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 IGHG1P01857 330 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 CD14P08571 375 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 TSPAN31Q12999 210 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 TOP3AQ13472 1001 aaPredicted RBP11.27□□□□□ -0.61
SSR4-211ENST00000486204 GK3PQ14409 553 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 MICAQ29983 383 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 BEX5Q5H9J7 111 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 C1orf146Q5VVC0 180 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 ANKRD16Q6P6B7 361 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 ZNF620Q6ZNG0 422 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 HDDC2Q7Z4H3 204 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
SSR4-211ENST00000486204 FANK1Q8TC84 345 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms