RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 KCTD21Q4G0X4 260 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 C5orf47Q569G3 176 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 OR52W1Q6IF63 320 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 KDM7AQ6ZMT4 941 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 C19orf35Q6ZS72 473 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 ZNF621Q6ZSS3 439 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 PUSL1Q8N0Z8 303 aaKnown RBP1.73□□□□□ -2.13
GCFC2-209ENST00000486016 ZADH2Q8N4Q0 377 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 ZNF557Q8N988 423 aaPredicted RBP1.73□□□□□ -2.13
GCFC2-209ENST00000486016 OR1N2Q8NGR9 330 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 OR2G3Q8NGZ4 309 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 OR2G2Q8NGZ5 317 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 DTX3LQ8TDB6 740 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 MCOLN3Q8TDD5 553 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 TMEM158Q8WZ71 300 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 N4BP2L2Q92802 583 aaPredicted RBP1.73□□□□□ -2.13
GCFC2-209ENST00000486016 LRRC58Q96CX6 371 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 HSFY1Q96LI6 401 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 SPIN2AQ99865 258 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 SPIN2BQ9BPZ2 258 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 ZNF2Q9BSG1 426 aaPredicted RBP1.73□□□□□ -2.13
GCFC2-209ENST00000486016 TMEM59Q9BXS4 323 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 MFFQ9GZY8 342 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 UGT1A7Q9HAW7 530 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 UGT1A10Q9HAW8 530 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 UGT1A8Q9HAW9 530 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 ETNK2Q9NVF9 386 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 KLHL28Q9NXS3 571 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 DEC1Q9P2X7 70 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 PISDQ9UG56 409 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 NUFIP1Q9UHK0 495 aaKnown RBP1.73□□□□□ -2.13
GCFC2-209ENST00000486016 HEBP2Q9Y5Z4 205 aa1.73□□□□□ -2.13
GCFC2-209ENST00000486016 MSH6P52701 1360 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 IGKV1D-13A0A0B4J2D9 117 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 UBXN8O00124 270 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 PEX7O00628 323 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 GOSR2O14653 212 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 ERLIN2O94905 339 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SLC25A27O95847 323 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 NDUFB10O96000 172 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SERPIND1P05546 499 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 C2P06681 752 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 UQCRFS1P1P0C7P4 283 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 IGKV1-13P0DP09 117 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 MCF2P10911 925 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 HNRNPH3P31942 346 aaKnown RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 RORAP35398 523 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SLC26A3P40879 764 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SUB1P53999 127 aaKnown RBP eCLIP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 ATP5IP56385 69 aaPredicted RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 KCNJ2P63252 427 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 ENPEPQ07075 957 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SSX2Q16385 188 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 GUCA2BQ16661 112 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 CHRFAM7AQ494W8 412 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 RNASEKQ6P5S7 137 aaKnown RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 NANOGNBQ7Z5D8 188 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 LHFPL3Q86UP9 236 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 FAM228AQ86W67 206 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 CDR2LQ86X02 465 aaPredicted RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 CCDC54Q8NEL0 328 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 AKR7LQ8NHP1 331 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SLC2A14Q8TDB8 520 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SDR42E1Q8WUS8 393 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SGK3Q96BR1 496 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 MED8Q96G25 268 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 TPD52L3Q96J77 140 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 SH3GL1Q99961 368 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 RARRES2Q99969 163 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 KCTD14Q9BQ13 255 aaPredicted RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 HDHD3Q9BSH5 251 aaPredicted RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 PKIBQ9C010 78 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 DNTTIP1Q9H147 329 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 DMAP1Q9NPF5 467 aaPredicted RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 PACSIN2Q9UNF0 486 aaPredicted RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 RRP15Q9Y3B9 282 aaKnown RBP1.72□□□□□ -2.13
GCFC2-209ENST00000486016 PCM1Q15154 2024 aa1.72□□□□□ -2.13
GCFC2-209ENST00000486016 MAP3K15Q6ZN16 1313 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 ZNF726A6NNF4 738 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 LAD1O00515 517 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 SOX15O60248 233 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 SUPT3HO75486 399 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CSF3P09919 207 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 IGHV3-43DP0DP04 118 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CNR1P21554 472 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CHMLP26374 656 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 IFNA8P32881 189 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 NMUP48645 174 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 AQP6Q13520 282 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 ARHGAP19Q14CB8 494 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 TGFBIQ15582 683 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 RSPO1Q2MKA7 263 aaPredicted RBP1.71□□□□□ -2.14
GCFC2-209ENST00000486016 PIGGQ5H8A4 983 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 TMEM107Q6UX40 140 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 ZYG11AQ6WRX3 759 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 LINC00173Q6ZV60 143 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 TAS2R42Q7RTR8 314 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 ASCL5Q7RTU5 278 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 C6orf120Q7Z4R8 191 aa1.71□□□□□ -2.14
GCFC2-209ENST00000486016 CAMK2N1Q7Z7J9 78 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms