RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 CHN2P52757 468 aa15.06■□□□□ 0
VIM-205ENST00000485947 SNRPGP62308 76 aaKnown RBP15.06■□□□□ 0
VIM-205ENST00000485947 SLC35A1P78382 337 aa15.06■□□□□ 0
VIM-205ENST00000485947 ZP4Q12836 540 aa15.06■□□□□ 0
VIM-205ENST00000485947 PMS2P3Q13401 168 aa15.06■□□□□ 0
VIM-205ENST00000485947 TOP3AQ13472 1001 aaPredicted RBP15.06■□□□□ 0
VIM-205ENST00000485947 ALG10Q5BKT4 473 aa15.06■□□□□ 0
VIM-205ENST00000485947 SSX8Q7RTT4 187 aa15.06■□□□□ 0
VIM-205ENST00000485947 IQCF1Q8N6M8 205 aa15.06■□□□□ 0
VIM-205ENST00000485947 LRRC75AQ8NAA5 344 aa15.06■□□□□ 0
VIM-205ENST00000485947 RHOXF1Q8NHV9 184 aa15.06■□□□□ 0
VIM-205ENST00000485947 ZNF417Q8TAU3 575 aa15.06■□□□□ 0
VIM-205ENST00000485947 HDAC2Q92769 488 aaKnown RBP15.06■□□□□ 0
VIM-205ENST00000485947 ZNF587Q96SQ5 575 aaPredicted RBP15.06■□□□□ 0
VIM-205ENST00000485947 NRIP3Q9NQ35 241 aa15.06■□□□□ 0
VIM-205ENST00000485947 TVP23BQ9NYZ1 205 aa15.06■□□□□ 0
VIM-205ENST00000485947 B3GALT5Q9Y2C3 310 aa15.06■□□□□ 0
VIM-205ENST00000485947 MCIDASD6RGH6 385 aa15.05■□□□□ -0
VIM-205ENST00000485947 SULT2B1O00204 365 aa15.05■□□□□ -0
VIM-205ENST00000485947 PLPP3O14495 311 aa15.05■□□□□ -0
VIM-205ENST00000485947 IMPA2O14732 288 aa15.05■□□□□ -0
VIM-205ENST00000485947 SURF4O15260 269 aa15.05■□□□□ -0
VIM-205ENST00000485947 OR6A2O95222 327 aa15.05■□□□□ -0
VIM-205ENST00000485947 TNFAIP8O95379 198 aa15.05■□□□□ -0
VIM-205ENST00000485947 CNOT4O95628 575 aaKnown RBP15.05■□□□□ -0
VIM-205ENST00000485947 GABRB1P18505 474 aa15.05■□□□□ -0
VIM-205ENST00000485947 SHC1P29353 583 aa15.05■□□□□ -0
VIM-205ENST00000485947 CCKARP32238 428 aa15.05■□□□□ -0
VIM-205ENST00000485947 RPL4P36578 427 aaKnown RBP15.05■□□□□ -0
VIM-205ENST00000485947 AQP2P41181 271 aa15.05■□□□□ -0
VIM-205ENST00000485947 DIO1P49895 249 aa15.05■□□□□ -0
VIM-205ENST00000485947 CXCR4P61073 352 aa15.05■□□□□ -0
VIM-205ENST00000485947 CSNK2BP67870 215 aa15.05■□□□□ -0
VIM-205ENST00000485947 MYBPC1Q00872 1141 aa15.05■□□□□ -0
VIM-205ENST00000485947 RPL18Q07020 188 aaKnown RBP15.05■□□□□ -0
VIM-205ENST00000485947 CDK5R2Q13319 367 aa15.05■□□□□ -0
VIM-205ENST00000485947 P2RY6Q15077 328 aa15.05■□□□□ -0
VIM-205ENST00000485947 SNAPC1Q16533 368 aa15.05■□□□□ -0
VIM-205ENST00000485947 RBM48Q5RL73 367 aaKnown RBP15.05■□□□□ -0
VIM-205ENST00000485947 PTCHD4Q6ZW05 846 aa15.05■□□□□ -0
VIM-205ENST00000485947 H1FNTQ75WM6 255 aaPredicted RBP15.05■□□□□ -0
VIM-205ENST00000485947 LSRQ86X29 649 aaPredicted RBP15.05■□□□□ -0
VIM-205ENST00000485947 STEAP2Q8NFT2 490 aa15.05■□□□□ -0
VIM-205ENST00000485947 MOSPD2Q8NHP6 518 aa15.05■□□□□ -0
VIM-205ENST00000485947 NRGNQ92686 78 aa15.05■□□□□ -0
VIM-205ENST00000485947 ZNF566Q969W8 418 aa15.05■□□□□ -0
VIM-205ENST00000485947 PLEKHA8Q96JA3 519 aa15.05■□□□□ -0
VIM-205ENST00000485947 SRXN1Q9BYN0 137 aa15.05■□□□□ -0
VIM-205ENST00000485947 FN3KQ9H479 309 aa15.05■□□□□ -0
VIM-205ENST00000485947 KLHL21Q9UJP4 597 aa15.05■□□□□ -0
VIM-205ENST00000485947 AKAP6Q13023 2319 aa15.04■□□□□ -0
VIM-205ENST00000485947 A0A1W2PNR3 127 aa15.04■□□□□ -0
VIM-205ENST00000485947 ZNF724A8MTY0 619 aa15.04■□□□□ -0
VIM-205ENST00000485947 DEFB108AA8MXU0 73 aa15.04■□□□□ -0
VIM-205ENST00000485947 EIF1BO60739 113 aaKnown RBP15.04■□□□□ -0
VIM-205ENST00000485947 ATE1O95260 518 aa15.04■□□□□ -0
VIM-205ENST00000485947 PPP1R3DO95685 299 aa15.04■□□□□ -0
VIM-205ENST00000485947 CD14P08571 375 aa15.04■□□□□ -0
VIM-205ENST00000485947 ADORA3P0DMS8 318 aa15.04■□□□□ -0
VIM-205ENST00000485947 ENPP1P22413 925 aa15.04■□□□□ -0
VIM-205ENST00000485947 NR1H2P55055 460 aa15.04■□□□□ -0
VIM-205ENST00000485947 OR2B6P58173 313 aa15.04■□□□□ -0
VIM-205ENST00000485947 EFNB1P98172 346 aa15.04■□□□□ -0
VIM-205ENST00000485947 PUDPQ08623 228 aa15.04■□□□□ -0
VIM-205ENST00000485947 SLC25A30Q5SVS4 291 aa15.04■□□□□ -0
VIM-205ENST00000485947 C6orf141Q5SZD1 244 aa15.04■□□□□ -0
VIM-205ENST00000485947 MEDAGQ5VYS4 303 aa15.04■□□□□ -0
VIM-205ENST00000485947 GPR139Q6DWJ6 353 aa15.04■□□□□ -0
VIM-205ENST00000485947 PAQR6Q6TCH4 344 aa15.04■□□□□ -0
VIM-205ENST00000485947 STAC2Q6ZMT1 411 aa15.04■□□□□ -0
VIM-205ENST00000485947 TMEM163Q8TC26 289 aa15.04■□□□□ -0
VIM-205ENST00000485947 ABHD3Q8WU67 409 aa15.04■□□□□ -0
VIM-205ENST00000485947 ROBO4Q8WZ75 1007 aa15.04■□□□□ -0
VIM-205ENST00000485947 ZHX1-C8orf76Q96EF9 292 aa15.04■□□□□ -0
VIM-205ENST00000485947 Q96MT0 163 aa15.04■□□□□ -0
VIM-205ENST00000485947 CMC2Q9NRP2 79 aa15.04■□□□□ -0
VIM-205ENST00000485947 INIPQ9NRY2 104 aa15.04■□□□□ -0
VIM-205ENST00000485947 BEX4Q9NWD9 120 aaPredicted RBP15.04■□□□□ -0
VIM-205ENST00000485947 TAS2R5Q9NYW4 299 aa15.04■□□□□ -0
VIM-205ENST00000485947 IL20RAQ9UHF4 553 aa15.04■□□□□ -0
VIM-205ENST00000485947 BLOC1S6Q9UL45 172 aa15.04■□□□□ -0
VIM-205ENST00000485947 CLEC4AQ9UMR7 237 aa15.04■□□□□ -0
VIM-205ENST00000485947 MYRFQ9Y2G1 1151 aa15.04■□□□□ -0
VIM-205ENST00000485947 MAGEA13PA6NCF6 341 aa15.03■□□□□ -0
VIM-205ENST00000485947 NPIPB13A6NJU9 1138 aa15.03■□□□□ -0
VIM-205ENST00000485947 NPIPB4C9JG80 1138 aa15.03■□□□□ -0
VIM-205ENST00000485947 M0R3G1 203 aa15.03■□□□□ -0
VIM-205ENST00000485947 CYTIPO60759 359 aa15.03■□□□□ -0
VIM-205ENST00000485947 TXNDC12O95881 172 aa15.03■□□□□ -0
VIM-205ENST00000485947 IFNGP01579 166 aa15.03■□□□□ -0
VIM-205ENST00000485947 IGHMP01871 453 aa15.03■□□□□ -0
VIM-205ENST00000485947 CCDC159P0C7I6 412 aa15.03■□□□□ -0
VIM-205ENST00000485947 NOS3P29474 1203 aa15.03■□□□□ -0
VIM-205ENST00000485947 CTXN1P60606 82 aa15.03■□□□□ -0
VIM-205ENST00000485947 OCLNQ16625 522 aa15.03■□□□□ -0
VIM-205ENST00000485947 DEFB113Q30KQ7 82 aa15.03■□□□□ -0
VIM-205ENST00000485947 KCTD21Q4G0X4 260 aa15.03■□□□□ -0
VIM-205ENST00000485947 BEX5Q5H9J7 111 aa15.03■□□□□ -0
VIM-205ENST00000485947 ZNF786Q8N393 782 aa15.03■□□□□ -0
VIM-205ENST00000485947 TCEANCQ8N8B7 351 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms