RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 C2orf73Q8N5S3 287 aaPredicted RBP3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 TRAM1L1Q8N609 369 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 TMEM35BQ8NCS4 154 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 ANKRD20A12PQ8NF67 263 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 OR7G3Q8NG95 312 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 LCN9Q8WX39 176 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 GGHQ92820 318 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 LYSMD1Q96S90 227 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 SNRNP25Q9BV90 132 aaKnown RBP3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 ACPTQ9BZG2 426 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 DEFB127Q9H1M4 99 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 DHX35Q9H5Z1 703 aaKnown RBP3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 Q9HAA7 133 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 SYTL2Q9HCH5 934 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 IMPAD1Q9NX62 359 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 C6orf203Q9P0P8 240 aaPredicted RBP3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 DNAJC12Q9UKB3 198 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 AP1M2Q9Y6Q5 423 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 HEATR5BQ9P2D3 2071 aa3.15□□□□□ -1.91
SMARCC1-207ENST00000485833 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 IGLV3-12A0A075B6K2 115 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 IGHV3-35A0A0C4DH35 117 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 FAM166BA8MTA8 275 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 C2orf74A8MZ97 194 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 GPR89AB7ZAQ6 455 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 G3V3Y1 287 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 CD5LO43866 347 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 VEGFDO43915 354 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 NME6O75414 186 aaPredicted RBP3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 EPOP01588 193 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 SNRPCP09234 159 aaKnown RBP3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 P0C879 139 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 GPR89BP0CG08 455 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 ARHGDIAP52565 204 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 EMP2P54851 167 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 HSPA14Q0VDF9 509 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 HEPACAMQ14CZ8 416 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC5A12Q1EHB4 618 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 MICAQ29983 383 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 CHRFAM7AQ494W8 412 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF658BQ4V348 819 aaPredicted RBP3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 GPRC6AQ5T6X5 926 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 FAM219BQ5XKK7 198 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC25A25Q6KCM7 469 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 H3F3CQ6NXT2 135 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 KDELC1Q6UW63 502 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 FAM151BQ6UXP7 276 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 C2orf66Q6UXQ4 117 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 FAM47EQ6ZV65 393 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 ARCQ7LC44 396 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 NT5DC3Q86UY8 548 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 LRRC75A-AS1Q8N1F1 130 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 LINC01555Q8NAE3 123 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 OR5AR1Q8NGP9 310 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 GDAP1Q8TB36 358 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 FBXO25Q8TCJ0 367 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 N4BP2L2Q92802 583 aaPredicted RBP3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 FAF2Q96CS3 445 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 CAPZA3Q96KX2 299 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 MCEEQ96PE7 176 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 TRIB3Q96RU7 358 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 ZSCAN5AQ9BUG6 496 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 OR52A5Q9H2C5 316 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 IL26Q9NPH9 171 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 TECRQ9NZ01 308 aaKnown RBP3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 PCSK1NQ9UHG2 260 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 MOKQ9UQ07 419 aa3.14□□□□□ -1.91
SMARCC1-207ENST00000485833 MED12LQ86YW9 2145 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 A0A096LNT2 108 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 A0A0J9YY10 115 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 A0A1W2PQ67 120 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 MGAT4DA6NG13 374 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TUBAL3A6NHL2 446 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 DEFB108AA8MXU0 73 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 MFSD11O43934 449 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 LYPD3O95274 346 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 PRB2P02812 416 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC35G4P0C7Q5 338 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 ELK1P19419 428 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 PSMB5P28074 263 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 LOXP28300 417 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 CD86P42081 329 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF136P52737 540 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 VSX2P58304 361 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 OC90Q02509 493 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TYSND1Q2T9J0 566 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC25A35Q3KQZ1 300 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 ANKRD20A8PQ5CZ79 823 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 NHSL2Q5HYW2 709 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 ARMC3Q5W041 872 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TMEM205Q6UW68 189 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 PRSS41Q7RTY9 318 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 ASPGQ86U10 573 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TUSC5Q8IXB3 177 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 FBXW8Q8N3Y1 598 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 LINC01006Q8NI28 216 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC22A8Q8TCC7 542 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 RNASE6Q93091 150 aaKnown RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF285Q96NJ3 590 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms