RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ZNF770Q6IQ21 691 aaPredicted RBP15.53■□□□□ 0.08
SREBF1-213ENST00000485080 FAM122BQ7Z309 247 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 ARIH2OSQ8N7S6 290 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 PAPD5Q8NDF8 572 aaKnown RBP15.53■□□□□ 0.08
SREBF1-213ENST00000485080 CANT1Q8WVQ1 401 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 NRGNQ92686 78 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 MCHR2Q969V1 340 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 RSRC1Q96IZ7 334 aaKnown RBP15.53■□□□□ 0.08
SREBF1-213ENST00000485080 FOXB1Q99853 325 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 LIME1Q9H400 295 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 DENND2DQ9H6A0 471 aaPredicted RBP15.53■□□□□ 0.08
SREBF1-213ENST00000485080 NRIP3Q9NQ35 241 aa15.53■□□□□ 0.08
SREBF1-213ENST00000485080 ZNF346Q9UL40 294 aaKnown RBP15.53■□□□□ 0.08
SREBF1-213ENST00000485080 DSCAMO60469 2012 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 A0A096LPE4 126 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 A0A1W2PPZ6 126 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 A0A1W2PR80 420 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 UNC119BA6NIH7 251 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 OR10H3O60404 316 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 ATE1O95260 518 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 PLAUP00749 431 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 IGKV3-15P01624 115 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 IGLV1-44P01699 117 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 RAF1P04049 648 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 QDPRP09417 244 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 APEHP13798 732 aaKnown RBP15.52■□□□□ 0.08
SREBF1-213ENST00000485080 ZNF83P51522 516 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 FXYD6P3P58550 94 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 TSPAN31Q12999 210 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 GPR139Q6DWJ6 353 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 ALKBH2Q6NS38 261 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 PGBD2Q6P3X8 592 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 ZNF813Q6ZN06 617 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 DPY19L2P2Q6ZN68 376 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 ASRGL1Q7L266 308 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 ZNF611Q8N823 705 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 LILRB1Q8NHL6 650 aaPredicted RBP15.52■□□□□ 0.08
SREBF1-213ENST00000485080 HDAC2Q92769 488 aaKnown RBP15.52■□□□□ 0.08
SREBF1-213ENST00000485080 TSPAN32Q96QS1 320 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 KATNB1Q9BVA0 655 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 B3GNT2Q9NY97 397 aa15.52■□□□□ 0.08
SREBF1-213ENST00000485080 ITPR3Q14573 2671 aa15.52■□□□□ 0.07
SREBF1-213ENST00000485080 VPS13CQ709C8 3753 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 CELSR1Q9NYQ6 3014 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 SHISA9B4DS77 424 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 HS3ST1O14792 307 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 TMCC2O75069 709 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 TXNDC12O95881 172 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 CBR1P16152 277 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 DNASE1P24855 282 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 THEM4Q5T1C6 240 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 SMARCD3Q6STE5 483 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 SYT14Q8NB59 555 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 GNPDA2Q8TDQ7 276 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 IGFBPL1Q8WX77 278 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 YY1AP1Q9H869 796 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 REEP1Q9H902 201 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 CCM2LQ9NUG4 571 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-213ENST00000485080 TMEM38BQ9NVV0 291 aa15.51■□□□□ 0.07
SREBF1-213ENST00000485080 ARRDC5A6NEK1 342 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 ABCD4O14678 606 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 CD53P19397 219 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 SDHAP31040 664 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 ARR3P36575 388 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 RPL4P36578 427 aaKnown RBP15.5■□□□□ 0.07
SREBF1-213ENST00000485080 ACVR1BP36896 505 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 ERVK-25P63136 954 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 MICAQ29983 383 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 RFX4Q33E94 735 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 ZNF672Q499Z4 452 aaPredicted RBP15.5■□□□□ 0.07
SREBF1-213ENST00000485080 SLC25A47Q6Q0C1 308 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 THSD4Q6ZMP0 1018 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 DPPA2Q7Z7J5 298 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 IGFN1Q86VF2 1251 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 SPATA24Q86W54 205 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 AKAP1Q92667 903 aaKnown RBP eCLIP15.5■□□□□ 0.071e-7■■■□□ 16.7
SREBF1-213ENST00000485080 SLC38A2Q96QD8 506 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 RBP7Q96R05 134 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 VNN3Q9NY84 501 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 ZNF224Q9NZL3 707 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 GRHPRQ9UBQ7 328 aa15.5■□□□□ 0.07
SREBF1-213ENST00000485080 SAMHD1Q9Y3Z3 626 aaKnown RBP15.5■□□□□ 0.07
SREBF1-213ENST00000485080 PRRC2AP48634 2157 aaKnown RBP15.49■□□□□ 0.07
SREBF1-213ENST00000485080 M0R1B8 84 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 IMPA2O14732 288 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 ARPC3O15145 178 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 CCNB2O95067 398 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 CST1P01037 141 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 OR8G3PP0DMU2 310 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 B4GALT1P15291 398 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 ZNF84P51523 738 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 IST1P53990 364 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 MRPS34P82930 218 aaKnown RBP15.49■□□□□ 0.07
SREBF1-213ENST00000485080 TOP3AQ13472 1001 aaPredicted RBP15.49■□□□□ 0.07
SREBF1-213ENST00000485080 CCDC121Q6ZUS5 278 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 ADCK1Q86TW2 530 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 SLC22A24Q8N4F4 322 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 IL17RDQ8NFM7 739 aa15.49■□□□□ 0.07
SREBF1-213ENST00000485080 NANOS1Q8WY41 292 aaKnown RBP15.49■□□□□ 0.07
SREBF1-213ENST00000485080 PIGTQ969N2 578 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms