RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 IGFBP5P24593 272 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 LSP1P33241 339 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 RBM34P42696 430 aaKnown RBP8.12□□□□□ -1.11
NUP50-215ENST00000484186 CHN2P52757 468 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 TAS2R41P59536 307 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 RPS23P62266 143 aaKnown RBP8.12□□□□□ -1.11
NUP50-215ENST00000484186 KLF10Q13118 480 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 RIN1Q13671 783 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 FXNQ16595 210 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 FAM120AOSQ5T036 256 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 REP15Q6BDI9 236 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 ERICH5Q6P6B1 374 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 NANOGNBQ7Z5D8 188 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 ZNF584Q8IVC4 421 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 NKAIN4Q8IVV8 208 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 PFN4Q8NHR9 129 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 MCHR2Q969V1 340 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 ZNF583Q96ND8 569 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 SH3GL3Q99963 347 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 TPK1Q9H3S4 243 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 MS4A5Q9H3V2 200 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 CHODLQ9H9P2 273 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 TMEM38BQ9NVV0 291 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 REV1Q9UBZ9 1251 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 RIMS3Q9UJD0 308 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 COL6A5A8TX70 2615 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 ATRQ13535 2644 aa8.12□□□□□ -1.11
NUP50-215ENST00000484186 LOC100653049A0A140TA62 436 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 A0A1W2PRG6 482 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SLC22A23A1A5C7 686 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 CENPBD1B2RD01 187 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 MCIDASD6RGH6 385 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 LYNX1G3V0Z9 82 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 M0R233 179 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 FXYD1O00168 92 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 PHF1O43189 567 aaPredicted RBP8.11□□□□□ -1.11
NUP50-215ENST00000484186 KRT34O76011 436 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 OR7A10O76100 309 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 OR5F1O95221 314 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 F13BP05160 661 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 LYNX1P0DP58 116 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SRD5A1P18405 259 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 TNFRSF1BP20333 461 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 THBS2P35442 1172 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 UGT2B15P54855 530 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 CLRN1P58418 232 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 RUNX1T1Q06455 604 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 RPL18Q07020 188 aaKnown RBP8.11□□□□□ -1.11
NUP50-215ENST00000484186 PIN1Q13526 163 aaPredicted RBP8.11□□□□□ -1.11
NUP50-215ENST00000484186 MAPRE2Q15555 327 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 HIST3H3Q16695 136 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 NRN1LQ496H8 165 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 TMEM53Q6P2H8 277 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 DEF8Q6ZN54 512 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SLC16A14Q7RTX9 510 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 DPPA2Q7Z7J5 298 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 LRP11Q86VZ4 500 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 PHC2Q8IXK0 858 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 OR4K5Q8NGD3 323 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 TMEM255BQ8WV15 326 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 C10orf82Q8WW14 230 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 TMEM239Q8WW34 195 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 LIPHQ8WWY8 451 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 HPS1Q92902 700 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SGTBQ96EQ0 304 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 ZNF347Q96SE7 839 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SYT3Q9BQG1 590 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 MRPL13Q9BYD1 178 aaKnown RBP8.11□□□□□ -1.11
NUP50-215ENST00000484186 RNF121Q9H920 327 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SAR1AQ9NR31 198 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 INIPQ9NRY2 104 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 GID8Q9NWU2 228 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 SLC7A8Q9UHI5 535 aa8.11□□□□□ -1.11
NUP50-215ENST00000484186 MALRD1Q5VYJ5 2156 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 MGRN1O60291 552 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 SHOX2O60902 331 aaPredicted RBP8.1□□□□□ -1.11
NUP50-215ENST00000484186 TRMUO75648 421 aaKnown RBP8.1□□□□□ -1.11
NUP50-215ENST00000484186 PTHP01270 115 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 TSPAN19P0C672 248 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 THRBP10828 461 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 ACADSP16219 412 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 TCN1P20061 433 aaPredicted RBP8.1□□□□□ -1.11
NUP50-215ENST00000484186 HNF1AP20823 631 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 COL8A2P25067 703 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 APEX1P27695 318 aaKnown RBP8.1□□□□□ -1.11
NUP50-215ENST00000484186 IL2RGP31785 369 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 KDELR2P33947 212 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 AQP2P41181 271 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 ALDH3B1P43353 468 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 OR1E2P47887 323 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 DAP3P51398 398 aaKnown RBP8.1□□□□□ -1.11
NUP50-215ENST00000484186 ZNF84P51523 738 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 SEC24CP53992 1094 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 MYBPC1Q00872 1141 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 SF3A3Q12874 501 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP50-215ENST00000484186 LAPTM4AQ15012 233 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 SLC36A2Q495M3 483 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 ELFN2Q5R3F8 820 aa8.1□□□□□ -1.11
NUP50-215ENST00000484186 CGB2Q6NT52 195 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms