RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, human

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP40-206	ENST00000483546	BSPH1	Q075Z2	132 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	TOP3A	Q13472	1001 aa	Predicted RBP	13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	MICA	Q29983	383 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	THEM4	Q5T1C6	240 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	C1orf146	Q5VVC0	180 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	ALKBH2	Q6NS38	261 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	LRFN4	Q6PJG9	635 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	ZNF813	Q6ZN06	617 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	C20orf204	Q6ZNR8	217 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	FAM122B	Q7Z309	247 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	CDH24	Q86UP0	819 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	WDFY1	Q8IWB7	410 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	FANK1	Q8TC84	345 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	MCHR2	Q969V1	340 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	ZNF837	Q96EG3	531 aa	Predicted RBP	13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	HS3ST6	Q96QI5	342 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	TSPAN32	Q96QS1	320 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	RBP7	Q96R05	134 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	NPAP1	Q9NZP6	1156 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	CRNN	Q9UBG3	495 aa	Predicted RBP	13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	FBXL3	Q9UKT7	428 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	CAD	P27708	2225 aa		13.65	□□□□□ -0.22
RPP40-206	ENST00000483546	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	DPRX	A6NFQ7	191 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	XKRY	O14609	159 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	GNGT2	O14610	69 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	IMPA2	O14732	288 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	FKBP6	O75344	327 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	FARS2	O95363	451 aa	Known RBP	13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	OR8G3P	P0DMU2	310 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	GSTM3	P21266	225 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	CD40	P25942	277 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	SDHA	P31040	664 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	SLC6A6	P31641	620 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	ARR3	P36575	388 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	RUNX1T1	Q06455	604 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	CD47	Q08722	323 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	RFX4	Q33E94	735 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	PAMR1	Q6UXH9	720 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	ADCK1	Q86TW2	530 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	IGFN1	Q86VF2	1251 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	CLDN22	Q8N7P3	220 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	HDAC2	Q92769	488 aa	Known RBP	13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	NMD3	Q96D46	503 aa	Known RBP	13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	ZNF570	Q96NI8	536 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	GPA33	Q99795	319 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	OR52D1	Q9H346	318 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	TMEM38B	Q9NVV0	291 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	DNAJB9	Q9UBS3	223 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	ST6GALNAC2	Q9UJ37	374 aa		13.64	□□□□□ -0.23
RPP40-206	ENST00000483546	TACC2	O95359	2948 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	AKAP6	Q13023	2319 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546		A0A096LPE4	126 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546		A0A1W2PPR1	153 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546		A0A1W2PPZ6	126 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546		A0A1W2PR80	420 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	ARPC3	O15145	178 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	IDH3B	O43837	385 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	TMCC2	O75069	709 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	DEAF1	O75398	565 aa	Predicted RBP	13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	UBL3	O95164	117 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	TXNDC12	O95881	172 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	IGKV3-15	P01624	115 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	RAF1	P04049	648 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	CBR1	P16152	277 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	ZNF26	P17031	533 aa	Predicted RBP	13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	NPR2	P20594	1047 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	ZNF83	P51522	516 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	FXYD6P3	P58550	94 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	ERVK-25	P63136	954 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	ZNF620	Q6ZNG0	422 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	DEPDC4	Q8N2C3	294 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	SYT14	Q8NB59	555 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	OR52L1	Q8NGH7	329 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	DUS3L	Q96G46	650 aa	Known RBP	13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	DGCR6L	Q9BY27	220 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	ADAM18	Q9Y3Q7	739 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	CDH10	Q9Y6N8	788 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546		U3KQV3	271 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546	MAST4	O15021	2626 aa		13.63	□□□□□ -0.23
RPP40-206	ENST00000483546		M0R1B8	84 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	ABCD4	O14678	606 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	HS3ST1	O14792	307 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	IGLV1-44	P01699	117 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	B4GALT1	P15291	398 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	DNASE1	P24855	282 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	GUCA1A	P43080	201 aa	Predicted RBP	13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	ARHGDIA	P52565	204 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	MRPS34	P82930	218 aa	Known RBP	13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	COX10	Q12887	443 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	KRR1	Q13601	381 aa	Known RBP	13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	SLC25A47	Q6Q0C1	308 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	CD300LD	Q6UXZ3	194 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	THSD4	Q6ZMP0	1018 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	RASSF6	Q6ZTQ3	369 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	SLC22A24	Q8N4F4	322 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	ZNF611	Q8N823	705 aa		13.62	□□□□□ -0.23
RPP40-206	ENST00000483546	AQP11	Q8NBQ7	271 aa		13.62	□□□□□ -0.23

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