RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SERPINE1P05121 402 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 CHRM4P08173 479 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 TACSTD2P09758 323 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 TFPTP0C1Z6 253 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 CBR1P16152 277 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF43P17038 809 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ITGA2P17301 1181 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 LBPP18428 481 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 NCF2P19878 526 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 RPS4Y1P22090 263 aaKnown RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 GIFP27352 417 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ARRB2P32121 409 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ARR3P36575 388 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 SELENOPP49908 381 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 DVL1P1P54792 670 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 CDH15P55291 814 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 TUBA1BP68363 451 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 TUBA4AP68366 448 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ROR2Q01974 943 aaKnown RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 RUNX1T1Q06455 604 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 BLMHQ13867 455 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 LARS2Q15031 903 aaKnown RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ZSWIM7Q19AV6 140 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 FAM174BQ3ZCQ3 159 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 LIN52Q52LA3 116 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 SPANXN4Q5MJ08 99 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 C1orf140Q5VVS0 124 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF621Q6ZSS3 439 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 CREB3L2Q70SY1 520 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 TUBA1AQ71U36 451 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 MEX3DQ86XN8 651 aaKnown RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 CCDC36Q8IYA8 594 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 LRRC34Q8IZ02 419 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF786Q8N393 782 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 SVOPLQ8N434 492 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF781Q8N8C0 355 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 OR52P1PQ8NH57 321 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 TBC1D15Q8TC07 691 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 IPCEF1Q8WWN9 437 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 BCL2L2Q92843 193 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 SPSB4Q96A44 273 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 CCDC115Q96NT0 180 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 SNX18Q96RF0 628 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 DOK1Q99704 481 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 LINC00470Q9BZP3 86 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ROPN1BQ9BZX4 212 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 ROPN1Q9HAT0 212 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 P2RX2Q9UBL9 471 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 RCE1Q9Y256 329 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 RAP2CQ9Y3L5 183 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.06□□□□□ -1.69e-11■□□□□ 10.1
CSDE1-207ENST00000483407 PLCE1Q9P212 2302 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 SVEP1Q4LDE5 3571 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 SH3PXD2BA1X283 911 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 WDR91A4D1P6 747 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM247A6NEH6 219 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 B4DSR2 109 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 RPL36A-HNRNPH2H7BZ11 118 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 M0QYG6 137 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 RFXANKO14593 260 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 UPK3AO75631 287 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 GKN3PP0CG01 181 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CALCRP30988 508 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 THBS4P35443 961 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CAPZA2P47755 286 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 RPL14P50914 215 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 P2RY4P51582 365 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CRISP3P54108 245 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CLDN17P56750 224 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 ABCE1P61221 599 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 IL1RL1Q01638 556 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 LGALS3BPQ08380 585 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 NPRL3Q12980 569 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 BNIP2Q12982 314 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 SNTB2Q13425 540 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 C1DQ13901 141 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CCNIQ14094 377 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CHI3L2Q15782 390 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 REP15Q6BDI9 236 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 SHQ1Q6PI26 577 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 RINLQ6ZS11 566 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 GLCCI1Q86VQ1 547 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 VRK2Q86Y07 508 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 EPHX4Q8IUS5 362 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 ZCCHC24Q8N2G6 241 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 GPR137CQ8N3F9 429 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 TEX29Q8N6K0 151 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 MFSD8Q8NHS3 518 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 PNPT1Q8TCS8 783 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 ZFAND2BQ8WV99 257 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CKAP2Q8WWK9 683 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 SLC25A36Q96CQ1 311 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 ZMYND19Q96E35 227 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 OR14A2Q96R54 314 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 OR52E6Q96RD3 313 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 ZBTB18Q99592 522 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 NUF2Q9BZD4 464 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 MYLK2Q9H1R3 596 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 METTL17Q9H7H0 456 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms