RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LCKP06239 509 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 LSP1P33241 339 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 RBBP4Q09028 425 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 SELPLGQ14242 412 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 SPATA46Q5T0L3 261 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 LRFN4Q6PJG9 635 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 EPGNQ6UW88 154 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 UGT2A3Q6UWM9 527 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 PEG10Q86TG7 708 aaKnown RBP11.87□□□□□ -0.51
VARS-226ENST00000483275 RANBP3LQ86VV4 465 aaPredicted RBP11.87□□□□□ -0.51
VARS-226ENST00000483275 GPR32P1Q8NGA4 272 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 OR4D11Q8NGI4 311 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 OR6S1Q8NH40 331 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 ZNF418Q8TF45 676 aaPredicted RBP11.87□□□□□ -0.51
VARS-226ENST00000483275 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 GCDHQ92947 438 aaPredicted RBP11.87□□□□□ -0.51
VARS-226ENST00000483275 SPDL1Q96EA4 605 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 MCHR1Q99705 422 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 CPPED1Q9BRF8 314 aaPredicted RBP11.87□□□□□ -0.51
VARS-226ENST00000483275 TMEM43Q9BTV4 400 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 TCF7L2Q9NQB0 619 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 HINT3Q9NQE9 182 aaKnown RBP11.87□□□□□ -0.51
VARS-226ENST00000483275 G6PC2Q9NQR9 355 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 TAS2R5Q9NYW4 299 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 GLTPQ9NZD2 209 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 C17orf100A8MU93 164 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 TPD52L2O43399 206 aaKnown RBP11.86□□□□□ -0.51
VARS-226ENST00000483275 RNF13O43567 381 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 PLPP2O43688 288 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 OR6A2O95222 327 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 LYPD3O95274 346 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 MPZL1O95297 269 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 EGR1P18146 543 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 SLC6A2P23975 617 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 KLF3P57682 345 aaPredicted RBP11.86□□□□□ -0.51
VARS-226ENST00000483275 ZNF74Q16587 644 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 TSTQ16762 297 aaKnown RBP11.86□□□□□ -0.51
VARS-226ENST00000483275 HSP90B2PQ58FF3 399 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 TMEM255AQ5JRV8 349 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 USP51Q70EK9 711 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 PTOV1Q86YD1 416 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 OR6T1Q8NGN1 323 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 C7orf26Q96N11 449 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 ZNF607Q96SK3 696 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 ZNF416Q9BWM5 594 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 TMPRSS13Q9BYE2 586 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 RNF121Q9H920 327 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 CDH20Q9HBT6 801 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 ESM1Q9NQ30 184 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 SLC52A3Q9NQ40 469 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 SLC7A7Q9UM01 511 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 PCDHB10Q9UN67 800 aa11.86□□□□□ -0.51
VARS-226ENST00000483275 A0A0A6YYJ9 748 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 TRAV20A0A0B4J274 112 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 PRORSD1PA6NEY8 169 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 POLR3GO15318 223 aaPredicted RBP11.85□□□□□ -0.51
VARS-226ENST00000483275 DHHO43323 396 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 KCNAB3O43448 404 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 DEAF1O75398 565 aaPredicted RBP11.85□□□□□ -0.51
VARS-226ENST00000483275 SASH3O75995 380 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 MFN2O95140 757 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 QDPRP09417 244 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 PGA4P0DJD7 388 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 PGA3P0DJD8 388 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 OR8G3PP0DMU2 310 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 MAKP20794 623 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 IDH3AP50213 366 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 TMEM33P57088 247 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 MTPNP58546 118 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 HILS1P60008 231 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 AGKQ53H12 422 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 ENTPD8Q5MY95 495 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 REP15Q6BDI9 236 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 PIWIL3Q7Z3Z3 882 aaKnown RBP11.85□□□□□ -0.51
VARS-226ENST00000483275 SNX32Q86XE0 403 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 LRRC18Q8N456 261 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 SYT14Q8NB59 555 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 HIPK4Q8NE63 616 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 OR6X1Q8NH79 312 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 SYNPRQ8TBG9 265 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 SNX33Q8WV41 574 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 ZNF566Q969W8 418 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 ZNF347Q96SE7 839 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 ARHGDIGQ99819 225 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 ZNF385DQ9H6B1 395 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 ZNF346Q9UL40 294 aaKnown RBP11.85□□□□□ -0.51
VARS-226ENST00000483275 ANGPT4Q9Y264 503 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 TRRAPQ9Y4A5 3859 aa11.85□□□□□ -0.51
VARS-226ENST00000483275 IGLV3-9A0A075B6K5 115 aa11.84□□□□□ -0.51
VARS-226ENST00000483275 IGHV1-69-2A0A0G2JMI3 117 aa11.84□□□□□ -0.51
VARS-226ENST00000483275 CHP2O43745 196 aa11.84□□□□□ -0.51
VARS-226ENST00000483275 MT-ATP6P00846 226 aa11.84□□□□□ -0.51
VARS-226ENST00000483275 UMPSP11172 480 aa11.84□□□□□ -0.51
VARS-226ENST00000483275 ZNF250P15622 560 aa11.84□□□□□ -0.51
VARS-226ENST00000483275 CDAP32320 146 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms