RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 SMR3AQ99954 134 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 NDEL1Q9GZM8 345 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 TXNIPQ9H3M7 391 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 ANKRD19PQ9H560 264 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 DENND2DQ9H6A0 471 aaPredicted RBP12.87□□□□□ -0.35
OPTN-210ENST00000482140 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
OPTN-210ENST00000482140 CA10Q9NS85 328 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 V9GYQ6 96 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 MTORP42345 2549 aa12.87□□□□□ -0.35
OPTN-210ENST00000482140 TRAV27A0A087WT01 109 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 A0A087WUU8 490 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 IGHV2OR16-5A0A0B4J2B6 119 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 NPIPB13A6NJU9 1138 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 NPIPB4C9JG80 1138 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 SSX4O60224 188 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 PRSS23O95084 383 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 H1F0P07305 194 aaKnown RBP12.86□□□□□ -0.35
OPTN-210ENST00000482140 TSPAN19P0C672 248 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 OR8G3PP0DMU2 310 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 RHCEP18577 417 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 MAKP20794 623 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 FUT4P22083 530 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 SERPINF1P36955 418 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 GIPRP48546 466 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 SLC9A3P48764 834 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 CTXN1P60606 82 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 SNRPD2P62316 118 aaKnown RBP12.86□□□□□ -0.35
OPTN-210ENST00000482140 RAB1AP62820 205 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
OPTN-210ENST00000482140 CD47Q08722 323 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 TNK1Q13470 666 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 KRT72Q14CN4 511 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 TAF11Q15544 211 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 ANKDD1AQ495B1 522 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 FGD3Q5JSP0 725 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 LRFN4Q6PJG9 635 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 MEX3DQ86XN8 651 aaKnown RBP12.86□□□□□ -0.35
OPTN-210ENST00000482140 DEFB107AQ8IZN7 70 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 OR51A7Q8NH64 312 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 NSMCE2Q96MF7 247 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 GORASP2Q9H8Y8 452 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 RNF121Q9H920 327 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 KRCC1Q9NPI7 259 aaPredicted RBP12.86□□□□□ -0.35
OPTN-210ENST00000482140 TMEM38BQ9NVV0 291 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 TMEM5Q9Y2B1 443 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 ARFGEF3Q5TH69 2177 aa12.86□□□□□ -0.35
OPTN-210ENST00000482140 H7C417 338 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 hCG_2039718K7EN88 272 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 PDE5AO76074 875 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 OR4A8P0C604 315 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 ITGA2P17301 1181 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 GPR4P46093 362 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 RPL27P61353 136 aaKnown RBP12.85□□□□□ -0.35
OPTN-210ENST00000482140 RUNX1T1Q06455 604 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 DAG1Q14118 895 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 ARMC4Q5T2S8 1044 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 TMEM53Q6P2H8 277 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 TBPL2Q6SJ96 375 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 CLEC2AQ6UVW9 174 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 Q71RC1 249 aaPredicted RBP12.85□□□□□ -0.35
OPTN-210ENST00000482140 IGFN1Q86VF2 1251 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 SKA3Q8IX90 412 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 CCDC197Q8NCU1 140 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 NUP37Q8NFH4 326 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 OR4K5Q8NGD3 323 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 OR13C2Q8NGS9 318 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 MCUR1Q96AQ8 359 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 PYURFQ96I23 114 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 RHNO1Q9BSD3 238 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 MRPL13Q9BYD1 178 aaKnown RBP12.85□□□□□ -0.35
OPTN-210ENST00000482140 KCNN2Q9H2S1 579 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 NOX3Q9HBY0 568 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 NDUFAF4Q9P032 175 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
OPTN-210ENST00000482140 A0A1W2PRQ8 180 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 B9A039 149 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 ARPC2O15144 300 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 DIRAS1O95057 198 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 FAM107AO95990 144 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 IGHMP01871 453 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 PATE4P0C8F1 98 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 ZNF14P17017 642 aaPredicted RBP12.84□□□□□ -0.35
OPTN-210ENST00000482140 MSX2P35548 267 aaPredicted RBP12.84□□□□□ -0.35
OPTN-210ENST00000482140 RPL4P36578 427 aaKnown RBP12.84□□□□□ -0.35
OPTN-210ENST00000482140 GALK2Q01415 458 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 HGFACQ04756 655 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 SNTB2Q13425 540 aaKnown RBP12.84□□□□□ -0.35
OPTN-210ENST00000482140 DGCR6Q14129 220 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 RAB39AQ14964 217 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 ADIPOQQ15848 244 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 SLC36A2Q495M3 483 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 SPATS1Q496A3 300 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 FAM205BPQ63HN1 556 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 KRT80Q6KB66 452 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms