RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 NUBP1P53384 320 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 SIRPAP78324 504 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 IL11RAQ14626 422 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 MELKQ14680 651 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 PON3Q15166 354 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 CDONQ4KMG0 1287 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 OR6V1Q8N148 313 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 PRSS33Q8NF86 280 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 SNX33Q8WV41 574 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 HSD17B8Q92506 261 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 HGDQ93099 445 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
CHD3-211ENST00000481999 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 DPAGT1Q9H3H5 408 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 SLC39A1Q9NY26 324 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 TEKT2Q9UIF3 430 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 FBXL2Q9UKC9 423 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.32
CHD3-211ENST00000481999 ARPC3O15145 178 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 EIF4E2O60573 245 aaKnown RBP13.02□□□□□ -0.32
CHD3-211ENST00000481999 ZNF780AO75290 641 aaPredicted RBP13.02□□□□□ -0.32
CHD3-211ENST00000481999 ALX3O95076 343 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 EPXP11678 715 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 ZNF24P17028 368 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 BTCP35070 178 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 SLC6A8P48029 635 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 PCOLCEQ15113 449 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 ZNF528Q3MIS6 628 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 RPL22L1Q6P5R6 122 aaKnown RBP13.02□□□□□ -0.32
CHD3-211ENST00000481999 LYPD8Q6UX82 237 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 BAIAP2L2Q6UXY1 529 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 SLC35F2Q8IXU6 374 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 PM20D2Q8IYS1 436 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 NUBPLQ8TB37 319 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 DEDD2Q8WXF8 326 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 SLC39A7Q92504 469 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 SLX1AQ9BQ83 275 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 ALG12Q9BV10 488 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 ZCCHC4Q9H5U6 513 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 ANKRD10Q9NXR5 420 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 GRHPRQ9UBQ7 328 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 HS3ST3B1Q9Y662 390 aa13.02□□□□□ -0.32
CHD3-211ENST00000481999 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 PCNX2A6NKB5 2137 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 A0A0A6YYJ9 748 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 EFNA2O43921 213 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 KLK3P07288 261 aaPredicted RBP13.02□□□□□ -0.33
CHD3-211ENST00000481999 UCHL1P09936 223 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 PRKCAP17252 672 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 DIO1P49895 249 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 MMP15P51511 669 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 FOXF1Q12946 379 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 ETFDHQ16134 617 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 SLC36A2Q495M3 483 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 CCDC58Q4VC31 144 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 BCL2L15Q5TBC7 163 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 JAZF1Q86VZ6 243 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 TOMM5Q8N4H5 51 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 OR5H6Q8NGV6 325 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 HYLS1Q96M11 299 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 NMNAT2Q9BZQ4 307 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 MED28Q9H204 178 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 SLC26A1Q9H2B4 701 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 WDR76Q9H967 626 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 GNG8Q9UK08 70 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 NUBP2Q9Y5Y2 271 aa13.02□□□□□ -0.33
CHD3-211ENST00000481999 OTOGLQ3ZCN5 2332 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 C7orf66A4D0T2 115 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 ITGA10O75578 1167 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 ATF1P18846 271 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 SDHAP31040 664 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 PTGDSP41222 190 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 DUSP3P51452 185 aaPredicted RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 GALK2Q01415 458 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 TCF15Q12870 199 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 C1QTNF12Q5T7M4 302 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 C1orf140Q5VVS0 124 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 ZNF417Q8TAU3 575 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 YIPF5Q969M3 257 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 GPX7Q96SL4 187 aaPredicted RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 ZNF587Q96SQ5 575 aaPredicted RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 DEFB126Q9BYW3 111 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 NUDT15Q9NV35 164 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 COPZ2Q9P299 210 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 PPIEQ9UNP9 301 aaKnown RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 A0A1B0GTH9 108 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 A0A1W2PNU3 283 aaPredicted RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 NPIPB7O75200 414 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 SNRPBP14678 240 aaKnown RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 POLR2HP52434 150 aaKnown RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 CEP78Q5JTW2 689 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 HAVCR2Q8TDQ0 301 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 PHYHIPQ92561 330 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 SCMH1Q96GD3 660 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 BRD7Q9NPI1 651 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 STMN3Q9NZ72 180 aa13.01□□□□□ -0.33
CHD3-211ENST00000481999 GPN3Q9UHW5 284 aaPredicted RBP13.01□□□□□ -0.33
CHD3-211ENST00000481999 TRAV36DV7A0A075B6V5 113 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms