RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CDH10Q9Y6N8 788 aa10.75□□□□□ -0.69
TRA2B-212ENST00000480461 ACANP16112 2415 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 TEX13CA0A0J9YWL9 993 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 RPL36A-HNRNPH2H7BZ11 118 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 H7C1C5 153 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 SOCS2O14508 198 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ARPC3O15145 178 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 RRP9O43818 475 aaKnown RBP10.74□□□□□ -0.69
TRA2B-212ENST00000480461 LYZL6O75951 148 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 CNOT4O95628 575 aaKnown RBP10.74□□□□□ -0.69
TRA2B-212ENST00000480461 OSMP13725 252 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 COX5AP20674 150 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 GIPRP48546 466 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 PCYT1AP49585 367 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ARHGDIAP52565 204 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 LCN6P62502 163 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ROR2Q01974 943 aaKnown RBP10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ITGADQ13349 1161 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 P2RY6Q15077 328 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 GABRA6Q16445 453 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 SLC35F1Q5T1Q4 408 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 TMEM236Q5W0B7 351 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 MEX3BQ6ZN04 569 aaKnown RBP10.74□□□□□ -0.69
TRA2B-212ENST00000480461 SVOPLQ8N434 492 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 IQCF1Q8N6M8 205 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 POMGNT2Q8NAT1 580 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 LINC01560Q8TB33 94 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 MCHR2Q969V1 340 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ZNF566Q969W8 418 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ADAD1Q96M93 576 aaKnown RBP10.74□□□□□ -0.69
TRA2B-212ENST00000480461 WFIKKN1Q96NZ8 548 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ALKBH3Q96Q83 286 aaPredicted RBP10.74□□□□□ -0.69
TRA2B-212ENST00000480461 IFT27Q9BW83 186 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 TSSK6Q9BXA6 273 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 POLDIP3Q9BY77 421 aaKnown RBP10.74□□□□□ -0.69
TRA2B-212ENST00000480461 CRLF2Q9HC73 371 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 ASB6Q9NWX5 421 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 GLTPQ9NZD2 209 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 UPB1Q9UBR1 384 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 HCFC1P51610 2035 aa10.74□□□□□ -0.69
TRA2B-212ENST00000480461 MAP1AP78559 2803 aaPredicted RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 VPS13CQ709C8 3753 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 SLC22A23A1A5C7 686 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 FAM221AA4D161 298 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 C16orf97H3BN30 126 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 DCTN6O00399 190 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 ARHGEF9O43307 516 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 SLC2A10O95528 541 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 ALPLP05186 524 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 THBDP07204 575 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 QDPRP09417 244 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 APEHP13798 732 aaKnown RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 HIST1H1CP16403 213 aaKnown RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 PSMB1P20618 241 aaKnown RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 MPGP29372 298 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 SDHAP31040 664 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 SLC6A6P31641 620 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 DAP3P51398 398 aaKnown RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 ZNF133P52736 654 aaPredicted RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 ARF1P84077 181 aaKnown RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 CDK5Q00535 292 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 FMODQ06828 376 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 GINS1Q14691 196 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 TAF11Q15544 211 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 ETFDHQ16134 617 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 CEACAM16Q2WEN9 425 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 LPCAT4Q643R3 524 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 SLC25A47Q6Q0C1 308 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 DMRTC2Q8IXT2 367 aaPredicted RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 LNX2Q8N448 690 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 CBR4Q8N4T8 237 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 WDR31Q8NA23 367 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 NPEPL1Q8NDH3 523 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 OR6N1Q8NGY5 312 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 MAGEE2Q8TD90 523 aaPredicted RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 HTRA1Q92743 480 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 BCL2L2Q92843 193 aaPredicted RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 STMN2Q93045 179 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 MUS81Q96NY9 551 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 NELFAQ9H3P2 528 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 PAPOLBQ9NRJ5 636 aaKnown RBP10.73□□□□□ -0.69
TRA2B-212ENST00000480461 GRHPRQ9UBQ7 328 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 UGT2A1Q9Y4X1 527 aa10.73□□□□□ -0.69
TRA2B-212ENST00000480461 PRSS37A4D1T9 235 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 OR6C68A6NDL8 312 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 E9PQ18 207 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 DLGAP1O14490 977 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 EI24O14681 340 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 IGHG1P01857 330 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 SCG5P05408 212 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 CDH2P19022 906 aaPredicted RBP10.72□□□□□ -0.69
TRA2B-212ENST00000480461 POU1F1P28069 291 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 CSNK1A1P48729 337 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 CRISP1P54107 249 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 GPR139Q6DWJ6 353 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 SEZ6L2Q6UXD5 910 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 TGIF2LYQ8IUE0 185 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 PARP8Q8N3A8 854 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 GPR137CQ8N3F9 429 aa10.72□□□□□ -0.69
TRA2B-212ENST00000480461 OR4K13Q8NH42 304 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms