RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SEC61A2Q9H9S3 476 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 GID8Q9NWU2 228 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 STX18Q9P2W9 335 aaKnown RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 EIF3KQ9UBQ5 218 aaKnown RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 SLC7A8Q9UHI5 535 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TMEFF2Q9UIK5 374 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TENM1Q9UKZ4 2725 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 BAG5Q9UL15 447 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 SH3GLB1Q9Y371 365 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 GRIP1Q9Y3R0 1128 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 ISPDA4D126 451 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 GMNCA6NCL1 334 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 MS4A18H0YCH9 400 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 RPL36A-HNRNPH2H7BZ11 118 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 CDC14BO60729 498 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 FMO6PO60774 539 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 STAMBPO95630 424 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 HPRP00739 348 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 IGLV1-44P01699 117 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 BGLAPP02818 100 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 F13BP05160 661 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 QDPRP09417 244 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SAGP10523 405 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 GPX2P18283 190 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 GCH1P30793 250 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 IL2RGP31785 369 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 PCGF2P35227 344 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 COMPP49747 757 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 P2RY4P51582 365 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 MYBPC1Q00872 1141 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 TEKQ02763 1124 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 HGFACQ04756 655 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 MAD2L1BPQ15013 274 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SGCAQ16586 387 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 MS4A18Q3C1V0 323 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF771Q7L3S4 317 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 DPPA2Q7Z7J5 298 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 PEG10Q86TG7 708 aaKnown RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 CARM1Q86X55 608 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 FUNDC1Q8IVP5 155 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM123Q8N131 208 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SLC22A24Q8N4F4 322 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 FAM169BQ8N8A8 192 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 PCYOX1LQ8NBM8 494 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SEMA6DQ8NFY4 1073 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 OR4K5Q8NGD3 323 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 NSMAFQ92636 917 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 MRPL24Q96A35 216 aaKnown RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF837Q96EG3 531 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SGTBQ96EQ0 304 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SLC41A3Q96GZ6 507 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 TIMD4Q96H15 378 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SLC25A44Q96H78 314 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 MAGEB18Q96M61 343 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SH3GL3Q99963 347 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 CPPED1Q9BRF8 314 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF416Q9BWM5 594 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 C1orf198Q9H425 327 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 INIPQ9NRY2 104 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 SLCO1C1Q9NYB5 712 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 GLTPQ9NZD2 209 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 B3GAT1Q9P2W7 334 aa6.11□□□□□ -1.43
COL17A1-205ENST00000480127 CRNNQ9UBG3 495 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-205ENST00000480127 IGKV1D-42A0A075B6H8 117 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 A0A0A6YYJ9 748 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 LOC102725191A0A1B0GVB3 256 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 A0A1W2PPL8 197 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 B4DSR2 109 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 LYNX1G3V0Z9 82 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 MRASO14807 208 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 DHHO43323 396 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 SHOX2O60902 331 aaPredicted RBP6.1□□□□□ -1.43
COL17A1-205ENST00000480127 LILRA1O75019 489 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 GMNNO75496 209 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 MFN2O95140 757 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 TACSTD2P09758 323 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 PATE4P0C8F1 98 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 LYNX1P0DP58 116 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 NAT2P11245 290 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 CCL2P13500 99 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ANPEPP15144 967 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 GLRXP35754 106 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 RPL4P36578 427 aaKnown RBP6.1□□□□□ -1.43
COL17A1-205ENST00000480127 GDI2P50395 445 aaKnown RBP6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ARFIP2P53365 341 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ACTG1P63261 375 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 GLO1Q04760 184 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF74Q16587 644 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 DUSP7Q16829 419 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 RUNDC3AQ59EK9 446 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 TTMPQ5BVD1 217 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 FAHD2BQ6P2I3 314 aaPredicted RBP6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ERICH5Q6P6B1 374 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ARL9Q6T311 187 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 FKBP9P1Q75LS8 142 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 MYPOPQ86VE0 399 aaPredicted RBP6.1□□□□□ -1.43
COL17A1-205ENST00000480127 CYP4Z1Q86W10 505 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 MSRB3Q8IXL7 192 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ALDH16A1Q8IZ83 802 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF786Q8N393 782 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms