RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 LSMEM1Q8N8F7 131 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 SCAIQ8N9R8 606 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 OR1J2Q8NGS2 313 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 OR6S1Q8NH40 331 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 DNAJA4Q8WW22 397 aaPredicted RBP14.55□□□□□ -0.08
VIM-204ENST00000478746 TMIGD2Q96BF3 282 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 SH3GL3Q99963 347 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 MS4A7Q9GZW8 240 aaPredicted RBP14.55□□□□□ -0.08
VIM-204ENST00000478746 LRMDAQ9H2I8 198 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 C1orf198Q9H425 327 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 SLC6A13Q9NSD5 602 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 PURGQ9UJV8 347 aaKnown RBP14.55□□□□□ -0.08
VIM-204ENST00000478746 RAB21Q9UL25 225 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 ZNF281Q9Y2X9 895 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 SPRY3O43610 288 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 SERPINI2O75830 405 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 IGHV3-13P01766 116 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 BGLAPP02818 100 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 SERPINE1P05121 402 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 PCGF2P35227 344 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 ETV4P43268 484 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 ABCE1P61221 599 aaKnown RBP14.54□□□□□ -0.08
VIM-204ENST00000478746 IFFO1Q0D2I5 559 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 ZNF154Q13106 437 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 TBC1D28Q2M2D7 210 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 ZBTB18Q99592 522 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 EPYCQ99645 322 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 NUF2Q9BZD4 464 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 THUMPD1Q9NXG2 353 aaKnown RBP14.54□□□□□ -0.08
VIM-204ENST00000478746 GLTPQ9NZD2 209 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 TESQ9UGI8 421 aaKnown RBP14.54□□□□□ -0.08
VIM-204ENST00000478746 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.54□□□□□ -0.08
VIM-204ENST00000478746 RAP2CQ9Y3L5 183 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 WNK1Q9H4A3 2382 aa14.54□□□□□ -0.08
VIM-204ENST00000478746 WDR91A4D1P6 747 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 TRAPPC2LH3BP13 241 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 TYROBPO43914 113 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 ERLIN1O75477 346 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 UBOX5O94941 541 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 FARS2O95363 451 aaKnown RBP14.53□□□□□ -0.08
VIM-204ENST00000478746 ANP32DO95626 131 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 SNAP29O95721 258 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 IGHV1-46P01743 117 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 ALDOCP09972 364 aaKnown RBP14.53□□□□□ -0.08
VIM-204ENST00000478746 OMGP23515 440 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 BIDP55957 195 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 C16orf87Q6PH81 154 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 ULK3Q6PHR2 472 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 WDR88Q6ZMY6 472 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 C10orf53Q8N6V4 93 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 CPEB3Q8NE35 698 aaKnown RBP14.53□□□□□ -0.08
VIM-204ENST00000478746 OR1J1Q8NGS3 322 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 AENQ8WTP8 325 aaKnown RBP14.53□□□□□ -0.08
VIM-204ENST00000478746 TMEM54Q969K7 222 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 SLC47A1Q96FL8 570 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 PKNOX2Q96KN3 472 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 MRI1Q9BV20 369 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 EGLN1Q9GZT9 426 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 TPT1P8Q9HAU6 139 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 TCF7L2Q9NQB0 619 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 AIG1Q9NVV5 245 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 MRPL39Q9NYK5 338 aaKnown RBP14.53□□□□□ -0.08
VIM-204ENST00000478746 SELENONQ9NZV5 590 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 MMP24Q9Y5R2 645 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 GPR45Q9Y5Y3 372 aa14.53□□□□□ -0.08
VIM-204ENST00000478746 IQCMA0A1B0GVH7 501 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 PLPP3O14495 311 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 KNG1P01042 644 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 SBK2P0C263 348 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 HTR2AP28223 471 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 MTNR1AP48039 350 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 PLP2Q04941 152 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 SRSF4Q08170 494 aaKnown RBP14.52□□□□□ -0.09
VIM-204ENST00000478746 OGFOD2Q6N063 350 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 LRFN4Q6PJG9 635 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 DPPA2Q7Z7J5 298 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 MOGAT1Q96PD6 335 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 CCT8L2Q96SF2 557 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 ROPN1BQ9BZX4 212 aaPredicted RBP14.52□□□□□ -0.09
VIM-204ENST00000478746 C20orf27Q9GZN8 174 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 ROPN1Q9HAT0 212 aaPredicted RBP14.52□□□□□ -0.09
VIM-204ENST00000478746 BCL2L10Q9HD36 194 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 TMEM38BQ9NVV0 291 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 PDP1Q9P0J1 537 aaPredicted RBP14.52□□□□□ -0.09
VIM-204ENST00000478746 EGFL7Q9UHF1 273 aa14.52□□□□□ -0.09
VIM-204ENST00000478746 POLR3KQ9Y2Y1 108 aaPredicted RBP14.52□□□□□ -0.09
VIM-204ENST00000478746 PLSCR5A0PG75 271 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 C11orf98E9PRG8 122 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 DHHO43323 396 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 MFN2O95140 757 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 GPANK1O95872 356 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 IGHMP01871 453 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 IL6P05231 212 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 ZCCHC18P0CG32 403 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 ZNF12P17014 697 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 ZNF718Q3SXZ3 478 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 SLC36A2Q495M3 483 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 FAM91A1Q658Y4 838 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 C17orf107Q6ZR85 190 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 SPATC1Q76KD6 591 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms