RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 KLHL13Q9P2N7 655 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 PROCRQ9UNN8 238 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 TRAPPC4Q9Y296 219 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 ARRDC5A6NEK1 342 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 MCIDASD6RGH6 385 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 H3BN98 237 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 ADAP00813 363 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 ANXA8P13928 327 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 MAKP20794 623 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 GSTM3P21266 225 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 FPR3P25089 353 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 RPL4P36578 427 aaKnown RBP12.73□□□□□ -0.37
USP11-207ENST00000478596 SLC9A3P48764 834 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP11-207ENST00000478596 PUDPQ08623 228 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 GUSBP1Q15486 140 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 LRRC36Q1X8D7 754 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 ZNF672Q499Z4 452 aaPredicted RBP12.73□□□□□ -0.37
USP11-207ENST00000478596 TMEM225Q6GV28 225 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 STAC2Q6ZMT1 411 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 H1FNTQ75WM6 255 aaPredicted RBP12.73□□□□□ -0.37
USP11-207ENST00000478596 SLC46A3Q7Z3Q1 461 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 DTX2Q86UW9 622 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 SCAIQ8N9R8 606 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 OR51A7Q8NH64 312 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 NRBF2Q96F24 287 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 FEVQ99581 238 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 RNF122Q9H9V4 155 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 EMC3Q9P0I2 261 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 STX18Q9P2W9 335 aaKnown RBP12.73□□□□□ -0.37
USP11-207ENST00000478596 ZNF175Q9Y473 711 aa12.73□□□□□ -0.37
USP11-207ENST00000478596 AQP7P3A6NL99 342 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 PDLIM1O00151 329 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 EI24O14681 340 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 SMAD9O15198 467 aaKnown RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 SOX14O95416 240 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 ATP6V1G2O95670 118 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 IGF2P01344 180 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 CDH2P19022 906 aaPredicted RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 PRKACGP22612 351 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 OMPP47874 163 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 HMGA2P52926 109 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 POU3F1Q03052 451 aaPredicted RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 RASGEF1BQ0VAM2 473 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 TSPAN31Q12999 210 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 TOP3AQ13472 1001 aaPredicted RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 GTF2IRD2BQ6EKJ0 949 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 GALNT5Q7Z7M9 940 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 GTF2IRD2Q86UP8 949 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 UEVLDQ8IX04 471 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 LRRC17Q8N6Y2 441 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 TMEM99Q8N816 258 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 TEX47Q8TBZ9 253 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 ABHD3Q8WU67 409 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 DNAJC9Q8WXX5 260 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 RBM4BQ9BQ04 359 aaKnown RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 FUZQ9BT04 418 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 RBM4Q9BWF3 364 aaKnown RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 NTN4Q9HB63 628 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 PAPOLBQ9NRJ5 636 aaKnown RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 MRPL39Q9NYK5 338 aaKnown RBP12.72□□□□□ -0.37
USP11-207ENST00000478596 KLHL9Q9P2J3 617 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 SEC14L4Q9UDX3 406 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 RASD1Q9Y272 281 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 POFUT2Q9Y2G5 429 aa12.72□□□□□ -0.37
USP11-207ENST00000478596 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
USP11-207ENST00000478596 LOC100289279A0A1B0GTE1 492 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 A0A1W2PRG6 482 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 FTCDNL1E5RQL4 147 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 CDC42EP2O14613 210 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 AKAP8O43823 692 aaKnown RBP12.71□□□□□ -0.37
USP11-207ENST00000478596 CD3EP07766 207 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 ZNF43P17038 809 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 USF1P22415 310 aaPredicted RBP12.71□□□□□ -0.37
USP11-207ENST00000478596 POU1F1P28069 291 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 PEX2P28328 305 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 SLC34A1Q06495 639 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 RNPS1Q15287 305 aaKnown RBP12.71□□□□□ -0.37
USP11-207ENST00000478596 ZBED5Q49AG3 693 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 ALG10Q5BKT4 473 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 NCMAPQ5T1S8 102 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 ABLIM2Q6H8Q1 611 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 RPL13AP3Q6NVV1 102 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 C1orf94Q6P1W5 598 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 ZBTB49Q6ZSB9 765 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 TMPRSS11FQ6ZWK6 438 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 ZER1Q7Z7L7 766 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 IGFN1Q86VF2 1251 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 CCDC103Q8IW40 242 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 SLC43A2Q8N370 569 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 CBR4Q8N4T8 237 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 ADPRHL1Q8NDY3 354 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 RNF128Q8TEB7 428 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 NEUROG1Q92886 237 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 DGCR6LQ9BY27 220 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 ACTR6Q9GZN1 396 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 GABARAPL1Q9H0R8 117 aa12.71□□□□□ -0.37
USP11-207ENST00000478596 VCX3BQ9H321 246 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms