RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 DEFA1P59665 94 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 DEFA3P59666 94 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 KCNAB1Q14722 419 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 CACNA1EQ15878 2313 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 NKAIN2Q5VXU1 208 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 CXXC5Q7LFL8 322 aaKnown RBP5.55□□□□□ -1.52
SH3D19-207ENST00000478503 OR4K13Q8NH42 304 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 NEIL3Q8TAT5 605 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 STT3BQ8TCJ2 826 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 BRIX1Q8TDN6 353 aaKnown RBP5.55□□□□□ -1.52
SH3D19-207ENST00000478503 C22orf15Q8WYQ4 148 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 UFD1Q92890 307 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 ELSPBP1Q96BH3 223 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 POTEKPQ9BYX7 375 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 PLEKHB1Q9UF11 243 aaPredicted RBP5.55□□□□□ -1.52
SH3D19-207ENST00000478503 CMAHPQ9Y471 501 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 V9GYH0 126 aa5.55□□□□□ -1.52
SH3D19-207ENST00000478503 KIAA1549LQ6ZVL6 1849 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SURF4O15260 269 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ZFPL1O95159 310 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SEMA4FO95754 770 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 PROS1P07225 676 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 BMP7P18075 431 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 P2RY4P51582 365 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ZNF136P52737 540 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 FXYD6P3P58550 94 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 PRPS1P60891 318 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ERVK-25P63136 954 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 E2F1Q01094 437 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 HHEXQ03014 270 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 PRKCDQ05655 676 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 STX4Q12846 297 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 MLLT11Q13015 90 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ZNF181Q2M3W8 571 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 PGGHGQ32M88 737 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 UQCC3Q6UW78 93 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SDR9C7Q8NEX9 313 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 OR2T33Q8NG76 320 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 OR56B1Q8NGI3 324 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 OR5M1Q8NGP8 315 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 GRPEL2Q8TAA5 225 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ZMYND19Q96E35 227 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 FOXN4Q96NZ1 517 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CTRCQ99895 268 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 MTHFD2LQ9H903 347 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 TMEM138Q9NPI0 162 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SIDT1Q9NXL6 827 aaKnown RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CCDC59Q9P031 241 aaKnown RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 NUFIP1Q9UHK0 495 aaKnown RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 MSRAQ9UJ68 235 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ADAM18Q9Y3Q7 739 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SDK2Q58EX2 2172 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 GPR179Q6PRD1 2367 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 A0A087WV48 116 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 TRBV2A0A0J9YWF9 115 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 A0A1W2PPV4 95 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 TBX19O60806 448 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 GAAP10253 952 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SHC1P29353 583 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CASP3P42574 277 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 RPS27P42677 84 aaKnown RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 RFX2P48378 723 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ARRB1P49407 418 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 GAS1P54826 345 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CRYZQ08257 329 aaKnown RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ENPP2Q13822 863 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CRMP1Q14194 572 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ODF4Q2M2E3 257 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ZNF620Q6ZNG0 422 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ESPNLQ6ZVH7 1005 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 PRR22Q8IZ63 422 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 DTWD2Q8NBA8 298 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 FLVCR1-AS1Q8TAF5 88 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 TMEM239Q8WW34 195 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 AP3S1Q92572 193 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SLC25A36Q96CQ1 311 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 THOC3Q96J01 351 aaKnown RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 FYTTD1Q96QD9 318 aaKnown RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ALKBH7Q9BT30 221 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 NRSN2Q9GZP1 204 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 HOXD1Q9GZZ0 328 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 C11orf54Q9H0W9 315 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-207ENST00000478503 GAREM1Q9H706 876 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CBLCQ9ULV8 474 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 LIPT1Q9Y234 373 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ALG5Q9Y673 324 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ARID1AO14497 2285 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 A0A1B0GVT2 93 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 DAPL1A0PJW8 107 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ARRDC5A6NEK1 342 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 SAGE2PA6NJ88 616 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 TMEM238C9JI98 176 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CHST10O43529 356 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 CNIH1O95406 144 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 PSKH1P11801 424 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 PYCR1P32322 319 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 IFNGR2P38484 337 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 ATP5J2P56134 94 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 OR12D2P58182 307 aa5.54□□□□□ -1.52
SH3D19-207ENST00000478503 IL11RAQ14626 422 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms