RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ANKDD1AQ495B1 522 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 PIGWQ7Z7B1 504 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 SLC22A24Q8N4F4 322 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 MOSPD2Q8NHP6 518 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 MCHR2Q969V1 340 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 BPIFA2Q96DR5 249 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 HSH2DQ96JZ2 352 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 RHNO1Q9BSD3 238 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 FNDC11Q9BVV2 318 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 FAM107BQ9H098 131 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 SPAG4Q9NPE6 437 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 RTTNQ86VV8 2226 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 A0A096LNT2 108 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 VSTM5A8MXK1 200 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 PIP5K1CO60331 668 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 TRMUO75648 421 aaKnown RBP18.82■□□□□ 0.6
COL9A3-211ENST00000477612 OR4A8P0C604 315 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 OR8G3PP0DMU2 310 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 IFI30P13284 250 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 YAP1P46937 504 aaKnown RBP18.82■□□□□ 0.6
COL9A3-211ENST00000477612 SNRPD2P62316 118 aaKnown RBP18.82■□□□□ 0.6
COL9A3-211ENST00000477612 PIGFQ07326 219 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 LAPTM4AQ15012 233 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 FXNQ16595 210 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 TSEN54Q7Z6J9 526 aaKnown RBP18.82■□□□□ 0.6
COL9A3-211ENST00000477612 NOXO1Q8NFA2 376 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 ACOT11Q8WXI4 607 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-211ENST00000477612 ZNF347Q96SE7 839 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 TXNIPQ9H3M7 391 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 ANKRD19PQ9H560 264 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 RPS6KA6Q9UK32 745 aa18.82■□□□□ 0.6
COL9A3-211ENST00000477612 IGHV4-30-2A0A087WSY4 118 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 A0A087WUU8 490 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 TMEM129A0AVI4 362 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 IGHMP01871 453 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 NCK1P16333 377 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 NR4A1P22736 598 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 THBS4P35443 961 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 CLRN1P58418 232 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 FHL1Q13642 323 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 C10orf128Q5T292 105 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 GLYATQ6IB77 296 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 CLEC2AQ6UVW9 174 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 FKBP9P1Q75LS8 142 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 DPPA2Q7Z7J5 298 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 LRRC75AQ8NAA5 344 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 FGFBP3Q8TAT2 258 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 FAM162AQ96A26 154 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 NMD3Q96D46 503 aaKnown RBP18.81■□□□□ 0.6
COL9A3-211ENST00000477612 MS4A3Q96HJ5 214 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 DOK1Q99704 481 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 RHCGQ9UBD6 479 aa18.81■□□□□ 0.6
COL9A3-211ENST00000477612 MCIDASD6RGH6 385 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 SERPINA5P05154 406 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 CSF3P09919 207 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 NPR2P20594 1047 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 MAKP20794 623 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 GIPRP48546 466 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 PTDSS1P48651 473 aaKnown RBP18.8■□□□□ 0.6
COL9A3-211ENST00000477612 SLC9A3P48764 834 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 PPOXP50336 477 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 GYS2P54840 703 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 GNGT1P63211 74 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 DAG1Q14118 895 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 ALG10Q5BKT4 473 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 VHLLQ6RSH7 139 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 ZNF584Q8IVC4 421 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 NRMQ8IXM6 262 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 HTRA1Q92743 480 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 SORCS2Q96PQ0 1159 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 GORASP2Q9H8Y8 452 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 SMURF2Q9HAU4 748 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 DCAF13Q9NV06 445 aaKnown RBP18.8■□□□□ 0.6
COL9A3-211ENST00000477612 ENPP4Q9Y6X5 453 aa18.8■□□□□ 0.6
COL9A3-211ENST00000477612 ANK3Q12955 4377 aaKnown RBP18.8■□□□□ 0.6
COL9A3-211ENST00000477612 FARS2O95363 451 aaKnown RBP18.79■□□□□ 0.6
COL9A3-211ENST00000477612 RAB36O95755 333 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 SLC25A16P16260 332 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 TMPRSS11FQ6ZWK6 438 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 MBOAT2Q6ZWT7 520 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 ZNF525Q8N782 197 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 FAM156AQ8NDB6 213 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 MAPK1IP1LQ8NDC0 245 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 C10orf105Q8TEF2 133 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 HDAC2Q92769 488 aaKnown RBP18.79■□□□□ 0.6
COL9A3-211ENST00000477612 KCNK17Q96T54 332 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 EGFL7Q9UHF1 273 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 ARL2BPQ9Y2Y0 163 aa18.79■□□□□ 0.6
COL9A3-211ENST00000477612 PATE4P0C8F1 98 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 HSD17B1P14061 328 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 GLRXP35754 106 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 EVX1P49640 407 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 ZNF84P51523 738 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 LOXL1Q08397 574 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-211ENST00000477612 SNTB2Q13425 540 aaKnown RBP18.78■□□□□ 0.6
COL9A3-211ENST00000477612 RAB39AQ14964 217 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 SYT14Q8NB59 555 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 FNDC8Q8TC99 324 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 FAM168AQ92567 244 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 C7orf34Q96L11 122 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms