RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ARPC3O15145 178 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 SIAH2O43255 324 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 KCNAB3O43448 404 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 E2F6O75461 281 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 TRMUO75648 421 aaKnown RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 LYZL6O75951 148 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 NDUFB2O95178 105 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 SOX14O95416 240 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 CNOT4O95628 575 aaKnown RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 PPP1R3DO95685 299 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 BCL10O95999 233 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 FCGR1AP12314 374 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 PSMB1P20618 241 aaKnown RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 POLR2IP36954 125 aaKnown RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 IFNGR2P38484 337 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 CDKN2AP42771 156 aaKnown RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF133P52736 654 aaPredicted RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 PRPS1P60891 318 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 RPL27P61353 136 aaKnown RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 LCN6P62502 163 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 PPP2R2BQ00005 443 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 IL1RL1Q01638 556 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 FMODQ06828 376 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 FAPQ12884 760 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 TOP3AQ13472 1001 aaPredicted RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 SLC36A3Q495N2 470 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 CLEC12AQ5QGZ9 265 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 SFRP5Q5T4F7 317 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 C9orf135Q5VTT2 229 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 KDM4DQ6B0I6 523 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 DPY19L2P2Q6ZN68 376 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 STK32CQ86UX6 486 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 TMEM200AQ86VY9 491 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 DMRTC2Q8IXT2 367 aaPredicted RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 CDK20Q8IZL9 346 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 PQLC1Q8N2U9 271 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 LINC00471Q8N535 108 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 IQCF1Q8N6M8 205 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 ARIH2OSQ8N7S6 290 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 WDR31Q8NA23 367 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 SYT14Q8NB59 555 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 WFDC11Q8NEX6 87 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 LINC01560Q8TB33 94 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 FANK1Q8TC84 345 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 HTRA1Q92743 480 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 RASD2Q96D21 266 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 SLC25A44Q96H78 314 aaPredicted RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 LRR1Q96L50 414 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 WFIKKN1Q96NZ8 548 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 BDH2Q9BUT1 245 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 GPR35Q9HC97 309 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 GLTPQ9NZD2 209 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 NKX1-2Q9UD57 310 aaPredicted RBP6.13□□□□□ -1.43
LIMD1-204ENST00000474665 UGT2A1Q9Y4X1 527 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 IER3IP1Q9Y5U9 82 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 DSCAMO60469 2012 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 TEX13CA0A0J9YWL9 993 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 A0A1W2PRG6 482 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SLC22A23A1A5C7 686 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 OR6C68A6NDL8 312 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF726A6NNF4 738 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 G3V2T6 193 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 C16orf97H3BN30 126 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 M0R3G1 203 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 DLGAP1O14490 977 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SOCS2O14508 198 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SLC43A1O75387 559 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SLC2A10O95528 541 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ALPLP05186 524 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SCG5P05408 212 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 APEHP13798 732 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ANXA8P13928 327 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ANPEPP15144 967 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ACADSP16219 412 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 HIST1H1CP16403 213 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 CTLA4P16410 223 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF23P17027 643 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 GSTM3P21266 225 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 LOXP28300 417 aaPredicted RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 MPGP29372 298 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SDHAP31040 664 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 RPL4P36578 427 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ACVR1BP36896 505 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 DAP3P51398 398 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ARF1P84077 181 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 MYBPC1Q00872 1141 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ROR2Q01974 943 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 COX10Q12887 443 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ITGADQ13349 1161 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 P2RY6Q15077 328 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 RCN1Q15293 331 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 TAF11Q15544 211 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 TAB1Q15750 504 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ETFDHQ16134 617 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 GABRA6Q16445 453 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 CEACAM16Q2WEN9 425 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ACSM5Q6NUN0 579 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SLC25A47Q6Q0C1 308 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 BEND4Q6ZU67 534 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF627Q7L945 461 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms