RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 ANKK1Q8NFD2 765 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 UTP4Q969X6 686 aaKnown RBP13.18□□□□□ -0.3
VARS-223ENST00000474643 CCDC124Q96CT7 223 aaKnown RBP13.18□□□□□ -0.3
VARS-223ENST00000474643 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 EMC6Q9BV81 110 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 KATNB1Q9BVA0 655 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 MAGIXQ9H6Y5 334 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 C20orf141Q9NUB4 165 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 MED29Q9NX70 200 aa13.18□□□□□ -0.3
VARS-223ENST00000474643 LOC102725191A0A1B0GVB3 256 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 FFAR1O14842 300 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 TRAF3IP2O43734 574 aaPredicted RBP13.17□□□□□ -0.3
VARS-223ENST00000474643 UPK3AO75631 287 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 DIRAS1O95057 198 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 FABP3P05413 133 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 SAGP10523 405 aaPredicted RBP13.17□□□□□ -0.3
VARS-223ENST00000474643 RHCEP18577 417 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 SERPINF1P36955 418 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 PDLIM4P50479 330 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 NPRL3Q12980 569 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 NRMQ8IXM6 262 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 OR6N1Q8NGY5 312 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 ACOT11Q8WXI4 607 aaPredicted RBP13.17□□□□□ -0.3
VARS-223ENST00000474643 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 TNFRSF13CQ96RJ3 184 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 KCNK17Q96T54 332 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 SEPHS2Q99611 448 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 LINC00470Q9BZP3 86 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 NMNAT1Q9HAN9 279 aaPredicted RBP13.17□□□□□ -0.3
VARS-223ENST00000474643 KRCC1Q9NPI7 259 aaPredicted RBP13.17□□□□□ -0.3
VARS-223ENST00000474643 CA10Q9NS85 328 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 NDUFAF4Q9P032 175 aa13.17□□□□□ -0.3
VARS-223ENST00000474643 HEATR1Q9H583 2144 aaKnown RBP13.16□□□□□ -0.3
VARS-223ENST00000474643 A0A1W2PRG6 482 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 SLC35F4A4IF30 521 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 HTR3EA5X5Y0 456 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 MCIDASD6RGH6 385 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 M0R3G1 203 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 IGF2P01344 180 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 ASAH2BP0C7U1 165 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 IFNGR1P15260 489 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 IDH3GP51553 393 aaPredicted RBP13.16□□□□□ -0.3
VARS-223ENST00000474643 BIDP55957 195 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 SMIM11AP58511 58 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 ARF1P84077 181 aaKnown RBP13.16□□□□□ -0.3
VARS-223ENST00000474643 VLDLRP98155 873 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 SPIBQ01892 262 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 ZP4Q12836 540 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 CAMK2DQ13557 499 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 TMEM249Q2WGJ8 235 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 RNF113BQ8IZP6 322 aaKnown RBP13.16□□□□□ -0.3
VARS-223ENST00000474643 OR4F15Q8NGB8 312 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 OR52J3Q8NH60 311 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 DUS3LQ96G46 650 aaKnown RBP13.16□□□□□ -0.3
VARS-223ENST00000474643 TXNDC15Q96J42 360 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 OR2M2Q96R28 347 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 ANKRD19PQ9H560 264 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 CRLF2Q9HC73 371 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 TAS2R5Q9NYW4 299 aa13.16□□□□□ -0.3
VARS-223ENST00000474643 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
VARS-223ENST00000474643 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 TCRBV5S2A0A599 114 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 TCRBV3S1A0A5B6 114 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 EFCAB9A8MZ26 197 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 B9A039 149 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 BCL10O95999 233 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 F13BP05160 661 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 OR4A8P0C604 315 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 CECR9P0C854 216 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 HOXB1P14653 301 aaPredicted RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 ATP6V1B2P21281 511 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 AQP2P41181 271 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 ACTR3P61158 418 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 NAAAQ02083 359 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 RPL18Q07020 188 aaKnown RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 KRTAP1-1Q07627 177 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 LOXL1Q08397 574 aaPredicted RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 GGTLC2Q14390 218 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 MELKQ14680 651 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 CEACAM16Q2WEN9 425 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 IQCCQ4KMZ1 466 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 C6orf52Q5T4I8 152 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 C1orf146Q5VVC0 180 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 TBPL2Q6SJ96 375 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 DNM1P46Q6ZS02 220 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 MBOAT2Q6ZWT7 520 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 PIWIL3Q7Z3Z3 882 aaKnown RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 OAFQ86UD1 273 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 MEX3DQ86XN8 651 aaKnown RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 ZDHHC21Q8IVQ6 265 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 OR10H5Q8NGA6 315 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 MAGEE2Q8TD90 523 aaPredicted RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 NANOS1Q8WY41 292 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms