RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 MSX2P35548 267 aaPredicted RBP17.56■□□□□ 0.4
HLA-B-252ENST00000474381 SMIM11AP58511 58 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 RUNX1T1Q06455 604 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 SLC22A24Q8N4F4 322 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 OR4F15Q8NGB8 312 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 FNDC8Q8TC99 324 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 MCUR1Q96AQ8 359 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 Q96MF0 132 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 TMEM38BQ9NVV0 291 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 ACTR3BQ9P1U1 418 aa17.56■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF469Q96JG9 3925 aaPredicted RBP17.56■□□□□ 0.4
HLA-B-252ENST00000474381 hCG_2039718K7EN88 272 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 UBL3O95164 117 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 FARS2O95363 451 aaKnown RBP17.55■□□□□ 0.4
HLA-B-252ENST00000474381 OR8G3PP0DMU2 310 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 CD79AP11912 226 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 BMP4P12644 408 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 CDKN1AP38936 164 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF84P51523 738 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 IDH3GP51553 393 aaPredicted RBP17.55■□□□□ 0.4
HLA-B-252ENST00000474381 RPL27P61353 136 aaKnown RBP17.55■□□□□ 0.4
HLA-B-252ENST00000474381 FHL1Q13642 323 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 MTX3Q5HYI7 312 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 FGD3Q5JSP0 725 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 C10orf128Q5T292 105 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 PODNL1Q6PEZ8 512 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 TBPL2Q6SJ96 375 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 DPPA2Q7Z7J5 298 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 LRRC75AQ8NAA5 344 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 OR51A7Q8NH64 312 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 MCHR2Q969V1 340 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF347Q96SE7 839 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 BDH2Q9BUT1 245 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 ALG12Q9BV10 488 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 NDEL1Q9GZM8 345 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 MUC13Q9H3R2 512 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 BARX1Q9HBU1 254 aaPredicted RBP17.55■□□□□ 0.4
HLA-B-252ENST00000474381 KRCC1Q9NPI7 259 aaPredicted RBP17.55■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF224Q9NZL3 707 aa17.55■□□□□ 0.4
HLA-B-252ENST00000474381 TRAV27A0A087WT01 109 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 CDC42EP2O14613 210 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 PDE5AO76074 875 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 CELA3BP08861 270 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 T-ENOLP0DO92 83 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 CALCRP30988 508 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 GPR4P46093 362 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 CTXN1P60606 82 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 CHRNB3Q05901 458 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 NPRL3Q12980 569 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 ZBED5Q49AG3 693 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 SYT14Q8NB59 555 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 NUP37Q8NFH4 326 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 OR13C2Q8NGS9 318 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 NMD3Q96D46 503 aaKnown RBP17.54■□□□□ 0.4
HLA-B-252ENST00000474381 C18orf12Q96KH6 178 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF75AQ96N20 296 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 TNFRSF13CQ96RJ3 184 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 KCNK17Q96T54 332 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 SEC61A2Q9H9S3 476 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 IL1RAPQ9NPH3 570 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 CA10Q9NS85 328 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 PRPF19Q9UMS4 504 aaKnown RBP17.54■□□□□ 0.4
HLA-B-252ENST00000474381 V9GYQ6 96 aa17.54■□□□□ 0.4
HLA-B-252ENST00000474381 MAP1AP78559 2803 aaPredicted RBP17.53■□□□□ 0.4
HLA-B-252ENST00000474381 IGHV2OR16-5A0A0B4J2B6 119 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 A6NIZ1 184 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 H7C417 338 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 RAB36O95755 333 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 FABP3P05413 133 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF14P17017 642 aaPredicted RBP17.53■□□□□ 0.4
HLA-B-252ENST00000474381 LIMS1P48059 325 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 RAP1BP61224 184 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 RAB1AP62820 205 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 RAP1AP62834 184 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 MYPOPQ86VE0 399 aaPredicted RBP17.53■□□□□ 0.4
HLA-B-252ENST00000474381 MEX3DQ86XN8 651 aaKnown RBP17.53■□□□□ 0.4
HLA-B-252ENST00000474381 SKA3Q8IX90 412 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 OR4K5Q8NGD3 323 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF519Q8TB69 540 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 BCAS4Q8TDM0 211 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 HDAC2Q92769 488 aaKnown RBP17.53■□□□□ 0.4
HLA-B-252ENST00000474381 POP5Q969H6 163 aaKnown RBP17.53■□□□□ 0.4
HLA-B-252ENST00000474381 FUZQ9BT04 418 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 CACNG6Q9BXT2 260 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 C1orf21Q9H246 121 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 NOX3Q9HBY0 568 aa17.53■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF346Q9UL40 294 aaKnown RBP17.53■□□□□ 0.4
HLA-B-252ENST00000474381 TRBV4-1A0A0J9YWV2 114 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 DIRAS1O95057 198 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 OMPP47874 163 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 MRPS34P82930 218 aaKnown RBP17.52■□□□□ 0.4
HLA-B-252ENST00000474381 CD47Q08722 323 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 TOP3AQ13472 1001 aaPredicted RBP17.52■□□□□ 0.4
HLA-B-252ENST00000474381 THEM4Q5T1C6 240 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 FAM46AQ96IP4 442 aaKnown RBP17.52■□□□□ 0.4
HLA-B-252ENST00000474381 COX4I2Q96KJ9 171 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 RBP7Q96R05 134 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 ZNF442Q9H7R0 627 aa17.52■□□□□ 0.4
HLA-B-252ENST00000474381 SH3PXD2BA1X283 911 aa17.51■□□□□ 0.39
HLA-B-252ENST00000474381 VSTM5A8MXK1 200 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms